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Kinetic Assay Analyzer.

Upload plate reader time-series data and compute initial reaction rates. Automatic linear region detection, blank subtraction, and path length correction. Data never leaves your browser.

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Validated2026-04-05
CitableMethods and citation included

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Load example kinetic-assay data to see the full workflow

When to use

  • Compute initial reaction rates from plate reader kinetic data (absorbance, fluorescence, luminescence)
  • Automatically identify the linear region of time-course data using R² optimization
  • Apply blank subtraction and path length correction to raw plate reader data
  • Compare reaction rates across wells, conditions, or enzyme concentrations
  • Export rates table for downstream Michaelis-Menten or IC50 analysis

Do not use for

  • Michaelis-Menten curve fitting (Km/Vmax) — use the rates from this tool as inputs to a dedicated Km calculator
  • Real-time PCR amplification curves — use the qPCR ΔΔCt tool instead
  • Non-linear time-courses where the linear region cannot be identified

Too few time points in the linear region give noisy rates

With only 3-4 early points, a single outlier dominates the slope. Collect data at 15-30 second intervals for at least 5-10 minutes to get a robust linear fit with ≥5 points in the window.

Path length depends on volume AND well geometry

The same volume in a flat-bottom vs. round-bottom 96-well plate gives different path lengths. Calibrate by measuring a known-absorbance solution in your specific plate type, or use the manufacturer’s empirical formula.

Blank wells should match everything except the variable

For an enzyme assay, blanks contain buffer + substrate but no enzyme. For an inhibitor screen, blanks contain enzyme + substrate but no inhibitor (this is your 100% activity control, not a true blank).

Temperature equilibration artifacts

Plate readers often show a curved start to the time-course as the plate equilibrates from room temperature to reading temperature. Allow 5-10 minutes of pre-incubation, or exclude the first few time points from analysis.

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Method

Ordinary least-squares linear regression within a sliding window. Auto-detection selects the window with highest R2\text{R}^{2} above a user-defined threshold (default 0.99). Blank subtraction uses the mean across all blank well time points.

2

Validated

Last validated 2026-04-05. Calculations are designed for planning and documentation support; verify procurement decisions against manufacturer specifications or institutional SOPs.

3

How to cite

How to Cite

ConductScience Kinetic Assay Analyzer (v1.0). ConductScience, Inc. 2026. Available at: https://conductscience.com/tools/kinetic-assay-analyzer

Bisswanger H. Enzyme assays. Perspectives in Science. 2014;1(1-6):41-55. doi:10.1016/j.pisc.2014.02.005

Measuring Initial Rates in Enzyme Kinetics

The initial rate (V₀) is measured during the linear phase of the reaction — typically the first 5-10% of substrate conversion. During this phase:

• [S] \approx [S]₀ (substrate is essentially unchanged) • [P] is small (no significant product inhibition) • The enzyme is saturated at its working [S]

The slope of the time-course during this phase equals V₀. This tool automates the identification of this linear region using R2\text{R}^{2}-based sliding window detection.

Blank Subtraction and Path Length Correction

Two corrections are often needed for plate reader data:

Blank subtraction: Removes background signal from the assay buffer, substrate auto-hydrolysis, or non-enzymatic reactions. Designate wells with no enzyme (or no substrate) as blanks.
Path length correction: Microplate wells have shorter path lengths than 1 cm cuvettes. For Beer-Lambert law calculations (ε\varepsilon, specific activity), divide absorbance by the well path length. Common values: 200 µL in 96-well \approx 0.55 cm; 100 µL \approx 0.29 cm.

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