(gff3) MMETSP re-assemblies

<p>Corresponding gff3 annotation files for the Trinity assembly files (https://doi.org/10.5281/zenodo.251828) generated from the dammit pipeline (https://github.com/camillescott/dammit).</p> <p>The Marine Microbial Eukaryotic Transcriptome Sequencing Project (MMETSP) data set contains cultured samples of pelagic and endosymbiotic marine eukaryotic species representing more than 40 phyla (Keeling et al. 2014).</p> <p>Methods for the de novo transcriptome assembly are described in the Eel pond khmer protocols (Brown et al. 2015).</p> <p>Scripts available on github:&nbsp;</p> <p>https://github.com/dib-lab/dib-MMETSP</p> <p>References:</p> <p>C. Titus Brown, Camille Scott, and Leigh Sheneman. 2015. The Eel Pond mRNAseq Protocol. https://khmer-protocols.readthedocs.io/en/ctb/mrnaseq/</p> <p>Keeling et al. 2014.&nbsp;The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing.&nbsp;http://dx.doi.org/10.1371/journal.pbio.100188</p>