Single Cell Preterm Dataset

<div> <p>The dataset is a CyTOF preterm women dataset, which collected 42 thousand cells across 36 dimensions from 42 samples\cite{peterson2021single}. The patients ranged from 17 preterm women and 25 term women, which is defined as the predicted label. The covariate of the preterm dataset includes gestational age, history of miscarriage, and the record of preeclampsia.&nbsp;</p> <p>Here is the file structure that fits in CytoCo-set input format (symbol "X(____)X" defined as file name describe):</p> <p>data folder</p> <ul> <li>csv_info.csv</li> <li>filenames_X(trials_number)X.json</li> <li>preterm_csv <ul> <li>all <ul> <li>X(sample_file_name)X.csv</li> <li>test_labels_X(trials_number)X.csv</li> <li>train_labels_X(trials_number)X.csv</li> </ul> </li> <li>marker.csv</li> </ul> </li> <li>tripletlists_X(covariate)X_X(trials_number)X <ul> <li>X(covariate)X_tripletlist_subpick_test_rffX(medianpooling_or_maxpooling)X_sameX(same_threhold_percange)X_diffX(diff_threhold_percange)X.txt</li> <li>X(covariate)X_tripletlist_subpick_trainval_rffX(medianpooling_or_maxpooling)X_sameX(same_threhold_percange)X_diffX(diff_threhold_percange)X.txt</li> </ul> </li> </ul> <p>&nbsp;</p> <p>The dataset uploaded all the sample's raw features data (csv file in "all" file) and some file examples. csv_info.csv records all sample's true labels and covariates.</p> <p>&nbsp;</p> </div>