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N/OFQ-NOPa models data

<p>This enty contains:</p> <ul> <li>MD input files and scripts to run the simulations of six different predicted N/OFQ-NOP complexes obtained with different modelling approaches, as follows:&nbsp;<br> <table> <tbody> <tr> <td>Model name</td> <td>Method</td> </tr> <tr> <td>5C1M_HM_P4</td> <td>&nbsp;Homology modelling + peptide docking</td> </tr> <tr> <td>6DDE_HM_P3 &nbsp; </td> <td>Homology modelling + peptide docking</td> </tr> <tr> <td>AF_MS1_P2</td> <td>AI-based modelling + peptide docking</td> </tr> <tr> <td>AF_MS2_P1</td> <td>AI-based modelling + peptide docking</td> </tr> <tr> <td>AF_R2M5</td> <td>AI-based modelling</td> </tr> <tr> <td>AFc_R1M5 &nbsp;</td> <td>AI-based modelling</td> </tr> </tbody> </table> </li> <li>MD topology (.psf) and trajectory (.dcd) files of all six systems plus vmd script (.vmd ) to visualise the&nbsp; trajectory with lowest peptide and receptor RMSD and RMSF profiles </li> </ul>

ShareScore

32/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
16
Reuse readiness
8
Engagement
0