GROMOS-CKP POPS/POPC simulations (versions 1 and 2) 298 K with GROMOS NH3 charges and PME
<p>GROMOS-CKP POPS/POPC simulations (298 K, starting structure from the CHARMM-GUI with the appropriate hydrogen atoms removed and with 22 POPS and 110 POPC lipids) performed with 1.4 nm cut-offs, PME and a long range dispersion correction. The charges for the NH3 part of the head group are taken from the standard GROMOS force field parameters. Two different simulations generated with different starting velocities are provided (the files are named v1 and v2 for these different simulations). The trajectories contain only the data from 400-500 ns of the simulations (as per the analysis provided on the nmrlipids blog) and additionally they have been processed with trjconv -skip 10 to keep the upload small.</p>
ShareScore
32/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 0