Sample datasets for Transposon insertion sequencing analysis tutorial
<p>The dataset contains five files:</p> <ol> <li>Tnseq-Tutorial-reads.fastqsanger.gz - A subset of TnSeq reads published in `Santiago, M., Matano, L. M., Moussa, S. H., Gilmore, M. S., Walker, S., & Meredith, T. C. (2015). A new platform for ultra-high density Staphylococcus aureus transposon libraries. <em>BMC Genomics</em>, <em>16</em>(1), 1–18. http://doi.org/10.1186/s12864-015-1361-3`</li> <li>condition_barcodes.fasta - Set of barcodes to separate reads from different experimental conditions</li> <li>construct_barcodes.fasta - Set of barcodes to separate reads from different transposon constructs</li> <li>staph_aur.fasta : Genome file for <em>Staphylococcus aureus </em></li> <li>staph_aur.fasta : Annotation file for <em>Staphylococcus aureus </em></li> </ol>
ShareScore
40/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 20
- Reuse readiness
- 8
- Engagement
- 0