SCOPe dataset with pairwise TM-score

<p>This dataset is the full set of all 15176 SCOPe domains from the ASTRAL subset (i.e., non-redundant set with &lt;40% sequence identity) of SCOPe database version 2.08.</p> <p><br> Files:<br> list &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;- list of domains ranked in ascending order of sequence length<br> astral.fasta &nbsp;- FASTA sequence converted from PDB file. The sequence header<br> &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; includes the SCOPe domain ID and the SCOPe classification.<br> &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; For example, &gt;d2oj5b1 b.83.1.0 means<br> &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; PDB ID 2oj5 chain B domain 1<br> &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Class: &nbsp; &nbsp; &nbsp; b<br> &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Fold: &nbsp; &nbsp; &nbsp; &nbsp;b.83<br> &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Superfamily: b.83.1<br> &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Family: &nbsp; &nbsp; &nbsp;b.83.1.0<br> CA.zip &nbsp; &nbsp; &nbsp; &nbsp;- CA coordinate of PDB files. Suitable for TM-align<br> pdb.zip &nbsp; &nbsp; &nbsp; - full atomic structure of PDB files.<br> TMfast.txt.gz - TM-score calculated by TMalign -fast<br> &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; domain1&nbsp;&nbsp; &nbsp;domain2&nbsp;&nbsp; &nbsp;TMscore1&nbsp;&nbsp; &nbsp;TMscore2&nbsp;<br> &nbsp;</p>