Ostrinia population genomics: Custom scripts and synteny mapping results

<p>We sampled seven <em>Ostrinia furnacalis </em>(Guenée) populations across 23 degrees of latitude in China to elucidate the genetic basis of diapause variation and evolutionary mechanisms driving parallel clinal responses. Using pooled whole-genome sequencing (Pool-seq) data, population genomic analyses revealed hundreds of single nucleotide polymorphisms (SNP) whose allele frequencies covaried with mean diapause phenotypes along the cline. Archived on Dryad are the custom R scripts used in the population genomic analyses as well as the mapping of <em>O. furnacalis</em> scaffolds to <em>Bombyx mori</em> reference chromosomes (for visualizing population genetic statistics across chromosomes).</p>