Annotated data for testing the High throughput Oligogenic Prioritizer (HOP)

<p>This repository contains the annotated OLIDA and 1KGP patients data that is necessary to reproduce the results of the HOP predictor presented in the article &quot;Prioritization of oligogenic variant combinations in whole exomes&quot;.&nbsp;<br> <br> The archive contains 102 files divided in two folders:&nbsp;</p> <ul> <li>olida_annotated_data contains 2 json files with the training set combinations and the testing set combinations respectively, annotated with the required features for predictions.</li> <li>patients_annotated_data contains 100 files, one for each 1KGP individual that was used to test the predictor, each annotated with the required features for predictions.&nbsp;</li> </ul> <p>These datasets are meant to be used with the corresponding scripts provided on github:&nbsp;https://github.com/oligogenic/HOP</p>