Training data for Xenopus nucleus for Oneat action classification
<p>Contains the npz files to train 4D oneat network for classification of xenopus nuclei into Normal and Mitosis cell types. In conjunction with the MTVKW repository this data contains patches of TZYX (3,8,64,64) that is then used to train the oneat network. Statistics</p> <p> </p> <table summary="The amount of training data generated for Xenopus action classification "> <caption>Statistics</caption> <tbody> <tr> <td>Normal</td> <td>Mitosis</td> <td>Normal(Aug)</td> <td>Mitosis(Aug)</td> </tr> <tr> <td>12530</td> <td>2796</td> <td>4178+4176</td> <td>932+932</td> </tr> </tbody> </table> <p> </p> <p>Aug = Augmentation using Poisson and Gaussian noise and flip XY transformation.</p> <p>The training data image size = (7663,3,8,64,64,1)</p> <p>The training data label size = (7663,3,10,1)</p> <p>Script: https://github.com/kapoorlab/MTVKW/blob/main/minus_06_create_oneat_patches.py</p>
ShareScore
16/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 0
- Reuse readiness
- 0
- Engagement
- 4