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990 results for “Hippocampus”
Hippocampus atlas outline
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Hippocampus coronal cartoon
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Sagittal brain with emphasis on hippocampus
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Figure 3 from: Han S-Y, Kim J-K, Kai Y, Senou H (2017) Seahorses of the Hippocampus coronatus complex: taxonomic revision, and description of Hippocampus haema, a new species from Korea and Japan (Teleostei, Syngnathidae). ZooKeys 712: 113-139. https://doi.org/10.3897/zookeys.712.14955
Figure 3 - Specimens within the Hippocampus coronatus complex examined in the present study. A–E H. haema A PKU 9641 (holotype, Busan, Korea) B FAKU 135644 (paratype, Maizuru, Japan) C KPM-NI 24769 (paratype, Akita, Japan) D RMNH.PISC.D 1541 (paratype, Japan) E RMNH.PISC.D 1542 (paratype, Japan) F–G H. coronatus F RMNH.PISC.D 1543 (lectotype, Japan) G RMNH.PISC.D 1544 (paralectotype, Japan) H–I H. sindonis H RMNH.PISC 3924 (Japan) I USNM 49730 (holotype, Hamamatsu, Japan).
Figure 6 from: Han S-Y, Kim J-K, Kai Y, Senou H (2017) Seahorses of the Hippocampus coronatus complex: taxonomic revision, and description of Hippocampus haema, a new species from Korea and Japan (Teleostei, Syngnathidae). ZooKeys 712: 113-139. https://doi.org/10.3897/zookeys.712.14955
Figure 6 - Distinctive morphological characters among species within the Hippocampus coronatus complex. A–C Tips on the corona flat A H. haema (PKU 9641, holotype) B H. coronatus (KPM-NI 7720) C H. sindonis (KPM-NI 19797). Numbers indicate coronet tips; the 5th coronet tip (posterior coronet spine) is indicated in red. The * indicates the appendage growing on the anterior coronet spine, which is a skin filament D–F Dorsal fin base spines (red arrows; wing-tip spines in D and E) D H. haema (PKU 9641, holotype) E H. coronatus (KPM-NI 7720) F H. sindonis (KPM-NI 19797).
Figure 2 from: Han S-Y, Kim J-K, Kai Y, Senou H (2017) Seahorses of the Hippocampus coronatus complex: taxonomic revision, and description of Hippocampus haema, a new species from Korea and Japan (Teleostei, Syngnathidae). ZooKeys 712: 113-139. https://doi.org/10.3897/zookeys.712.14955
Figure 2 - Meristic and morphometric characters used in Hippocampus analyses following Lourie (2003). Abbreviations: eye spine (ES), cheek spine (CS), anterior coronet spine (ACS), posterior coronet spine (PCS), corona (Coa), dorsal spine of the first trunk ring (FTrRDS), dorsal spine of the last trunk ring (LTrRDS; Wing-tip spine [WS] as in H. coronatus and H. haema). Points used for measurements: a tip of snout (upper jaw) b anterior side of tubercle/spine c anterior edge of orbit d posterior edge of orbit e mid-point of cleithral ring f median groove (central depression) of coronet g gill opening h mid-point of lateral ridge of the last trunk ring i tail tip. Measurements: a–b snout length (SnL) c–d eye diameter (ED), a–e head length (HL) e–f coronet height from mid-point of cleithral ring (CHMC) f–g coronet height from gill opening (CHGO) e–h trunk length (TrL) h–i tail length (TaL) a–e–h–i standard length (SL). Photographed specimen H. haema PKU 10129 (paratype).
Figure 1 from: Han S-Y, Kim J-K, Kai Y, Senou H (2017) Seahorses of the Hippocampus coronatus complex: taxonomic revision, and description of Hippocampus haema, a new species from Korea and Japan (Teleostei, Syngnathidae). ZooKeys 712: 113-139. https://doi.org/10.3897/zookeys.712.14955
Figure 1 - Distribution of the species within the Hippocampus coronatus complex: H. haema (red circles; the filled red circle indicates the holotype), H. coronatus (green triangles), and H. sindonis (blue squares; the filled blue square indicates the holotype).
Figure 5 from: Han S-Y, Kim J-K, Kai Y, Senou H (2017) Seahorses of the Hippocampus coronatus complex: taxonomic revision, and description of Hippocampus haema, a new species from Korea and Japan (Teleostei, Syngnathidae). ZooKeys 712: 113-139. https://doi.org/10.3897/zookeys.712.14955
Figure 5 - X-radiographs of Hippocampus specimens. A H. haema PKU 9641 (holotype) B H. haema NIBR-P 5412 (paratype) C H. coronatus FAKU 137348 D H. sindonis FAKU 137340 E H. sindonis USNM 49730 (holotype) F H. mohnikei FAKU 135643. a' indicates the anterior coronet spine; 5' indicates the posterior coronet spine (the 5th tip on the corona); the first (1) and last (10 or 11) trunk rings are marked.
Figure 7 from: Han S-Y, Kim J-K, Kai Y, Senou H (2017) Seahorses of the Hippocampus coronatus complex: taxonomic revision, and description of Hippocampus haema, a new species from Korea and Japan (Teleostei, Syngnathidae). ZooKeys 712: 113-139. https://doi.org/10.3897/zookeys.712.14955
Figure 7 - Neighbor-joining tree showing the relationships among species of Hippocampus based on mtDNA sequences. A tree produced using multiple loci (cytochrome b, 16S rRNA, and 12S rRNA) as partitions B tree produced using 12S rRNA, only. Numbers in branches indicate bootstrap probabilities obtained from 1000 bootstrap replications. Scale bar = genetic distance of 0.02.
Figure 4 from: Han S-Y, Kim J-K, Kai Y, Senou H (2017) Seahorses of the Hippocampus coronatus complex: taxonomic revision, and description of Hippocampus haema, a new species from Korea and Japan (Teleostei, Syngnathidae). ZooKeys 712: 113-139. https://doi.org/10.3897/zookeys.712.14955
Figure 4 - Coloration of fresh specimens. A Hippocampus haema (paratype, PKU 9424) B H. coronatus (FAKU 137351) C H. sindonis (FAKU 137339).
Single nucleus sequencing analysis of rat hippocampus reveals the landscape of latent phase temporal lobe epilepsy
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Adult neurogenesis improves spatial information encoding in the mouse hippocampus - hM4Di Silencing
<p><strong>In vivo two-photon imaging dataset for Frechou et al. "Adult neurogenesis improves spatial information encoding in the mouse hippocampus"</strong></p> <p>This dataset includes data from CNO-induced chemogenetic silencing experiments in hM4Di+ and hM4Di-(control) mice. There is another Zenodo dataset with the remaining hM4Di-(control) mice <a href="https://doi.org/10.5281/zenodo.10949624">here</a>. The folder for each mouse includes baseline (pre) and post-CNO (cno) recordings.</p> <p>For each recording we included raw imaging data consisting of:</p> <ul> <li>Individual frames (.tif files) from 3 consecutive 3 min Ca2+ imaging movies (which were concatenated for analysis)</li> <li>Microscope settings metadata (Experiment.xml)</li> <li>Mouse location data (Episode001.h5 in SyncData folder) containing rotary encoder and RFID data</li> </ul> <p>Some analyzed data is also included:</p> <ul> <li>Suite2p analysis data (<strong>Suite2p</strong> folder)</li> <li><strong>fluorescence.npy </strong>contains raw fluorescence data (the F output of Suite2p data extraction). Rows are individual cells and columns are frames (i.e. timepoints) acquired at 15.253 Hz.</li> <li><strong>positions.npy </strong>contains the position of the mouse on the treadmill belt indexed from 0 to 100.</li> </ul> <p>Both NumPy(.npy) files are the output of the Preprocessing.py code, part of the analysis pipeline used for data analysis in the original publication, which can be found at <a href="https://github.com/GoncalvesLab/Frechou-et-al-Neurogenesis">https://github.com/GoncalvesLab/Frechou-et-al-Neurogenesis</a></p> <p>Refer to the original publication for additional information. The sex of individual mice is as follows:</p> <p> </p> <table> <tbody> <tr> <td><strong>Group</strong></td> <td><strong>Mouse #</strong></td> <td><strong>Sex</strong></td> <td><strong>Group</strong></td> <td><strong>Mouse #</strong></td> <td><strong>Sex</strong></td> </tr> <tr> <td>hM4Di+</td> <td>M1</td> <td>M</td> <td>hM4Di-</td> <td>M1</td> <td>M</td> </tr> <tr> <td> </td> <td>M2</td> <td>M</td> <td> </td> <td>M2</td> <td>M</td> </tr> <tr> <td> </td> <td>M3</td> <td>F</td> <td> </td> <td>M3</td> <td>M</td> </tr> <tr> <td> </td> <td>M4</td> <td>F</td> <td> </td> <td> </td> <td> </td> </tr> <tr> <td> </td> <td>M5</td> <td>M</td> <td> </td> <td> </td> <td> </td> </tr> <tr> <td> </td> <td>M6</td> <td>M</td> <td> </td> <td> </td> <td> </td> </tr> <tr> <td> </td> <td>M7</td> <td>M</td> <td> </td> <td> </td> <td> </td> </tr> <tr> <td> </td> <td>M8</td> <td>F</td> <td> </td> <td> </td> <td> </td> </tr> <tr> <td> </td> <td>M9</td> <td>F</td> <td> </td> <td> </td> <td> </td> </tr> </tbody> </table>
Fig. 4. A in Scientific Note Novel sex-related characteristics of the longsnout seahorse Hippocampus reidi Ginsburg, 1933
Fig. 4. A captive-reared pair of Hippocampus reidi with the male (right) showing highlighted dorsolateral spots and keel, during courtship. Photo credits: T. P. R. Oliveira.
Figure 6 from: Short G, Smith R, Motomura H, Harasti D, Hamilton H (2018) Hippocampus japapigu, a new species of pygmy seahorse from Japan, with a redescription of H. pontohi (Teleostei, Syngnathidae). ZooKeys 779: 27-49. https://doi.org/10.3897/zookeys.779.24799
Figure 6 Hippocampuspontohi, AMS I.47833-001, preserved male non-type, 13.9 mm SL, Cape Kri, Raja Ampat, Indonesia (photograph Graham Short).
Figure 3 from: Short G, Smith R, Motomura H, Harasti D, Hamilton H (2018) Hippocampus japapigu, a new species of pygmy seahorse from Japan, with a redescription of H. pontohi (Teleostei, Syngnathidae). ZooKeys 779: 27-49. https://doi.org/10.3897/zookeys.779.24799
Figure 3 Hippocampusjapapigu, UW 157506, preserved female holotype, 16.33 mm SL (left), and UW 157506, 15.59 mm SL, male paratype (right), Hachijo-jima Island, Izu Islands, Japan (photograph Graham Short).
Figure 2 from: Short G, Smith R, Motomura H, Harasti D, Hamilton H (2018) Hippocampus japapigu, a new species of pygmy seahorse from Japan, with a redescription of H. pontohi (Teleostei, Syngnathidae). ZooKeys 779: 27-49. https://doi.org/10.3897/zookeys.779.24799
Figure 2 Hippocampusjapapigu, paratypes directly after collection (A) UW 157507, male, 15.59 mm SL (B) KAUM-I. 111770, female, 14.54 mm SL, Hachijo-jima Island, Izu Islands, Japan (photographs Hiroyuki Motomura).
Figure 9 from: Short G, Smith R, Motomura H, Harasti D, Hamilton H (2018) Hippocampus japapigu, a new species of pygmy seahorse from Japan, with a redescription of H. pontohi (Teleostei, Syngnathidae). ZooKeys 779: 27-49. https://doi.org/10.3897/zookeys.779.24799
Figure 9 Computed tomography scanned anterior trunk area of Hippocampusjapapigu, UW 157506, male holotype, 16.33 mm SL, Hachijo-jima Island, Japan (photograph Graham Short). A Anterolateral view B Lateral view. Note the pair of spines projecting dorsolaterad on STrR1 and triangular bony mounds arched dorsad on STrR2, STrR3, and STrR4. Abbreviations: CL, cliethral ring; STrR1, first superior trunk ridge; STrR2, second superior trunk ridge; STrR3, third superior trunk ridge; STrR4, fourth superior trunk ridge; STrR5, fifth superior trunk ridge; STrR6, sixth superior trunk ridge.
Figure 5 from: Short G, Smith R, Motomura H, Harasti D, Hamilton H (2018) Hippocampus japapigu, a new species of pygmy seahorse from Japan, with a redescription of H. pontohi (Teleostei, Syngnathidae). ZooKeys 779: 27-49. https://doi.org/10.3897/zookeys.779.24799
Figure 5 Hippocampusjapapigu in situ, Hachijo-jima Island, Izu Islands, Japan from 10 m depth (photograph Richard Smith).
Supplementary material 2 from: Short G, Smith R, Motomura H, Harasti D, Hamilton H (2018) Hippocampus japapigu, a new species of pygmy seahorse from Japan, with a redescription of H. pontohi (Teleostei, Syngnathidae). ZooKeys 779: 27-49. https://doi.org/10.3897/zookeys.779.24799
NJ tree of COI sequences from 21 specimens of H.pontohi and those referred to H.severnsi :
Figure 10 from: Short G, Smith R, Motomura H, Harasti D, Hamilton H (2018) Hippocampus japapigu, a new species of pygmy seahorse from Japan, with a redescription of H. pontohi (Teleostei, Syngnathidae). ZooKeys 779: 27-49. https://doi.org/10.3897/zookeys.779.24799
Figure 10 Computed tomography scanned anterior trunk area of Hippocampuspontohi, AMS I.47833-001, preserved male non-type, 16.33 mm SL, Cape Kri, Raja Ampat, Indonesia (photograph Graham Short). A Anterolateral view B Dorsal view. Note the double pair of spines projecting dorsolaterad on STrR1 and STrR1, respectively, and laterodorsal surface flat on STrR3, and STrR4. Abbreviations: CO, coronet; CL, cliethral ring; STrR1, first superior trunk ridge; STrR2, second superior trunk ridge; STrR3, third superior trunk ridge; STrR4, fourth superior trunk ridge; STrR5, fifth superior trunk ridge; STrR6, sixth superior trunk ridge.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.