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218 results for “Pleosporales”
Supplementary material 2 from: Vohník M, Borovec O, Kolaříková Z, Sudová R, Réblová M (2019) Extensive sampling and high-throughput sequencing reveal Posidoniomyces atricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidonia oceanica. MycoKeys 55: 59-86. https://doi.org/10.3897/mycokeys.55.35682
: Data type: species data
Figure 6 from: Vohník M, Borovec O, Kolaříková Z, Sudová R, Réblová M (2019) Extensive sampling and high-throughput sequencing reveal Posidoniomyces atricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidonia oceanica. MycoKeys 55: 59-86. https://doi.org/10.3897/mycokeys.55.35682
Figure 6 Colonial morphotypes of Posidoniomycesatricolor in vitro (type isolate BRK-21). a Compact morphotype with substrate mycelium b, d compact colonies with a cerebriform pattern c colony of P.atricolor on PCA e rhizoidal and compact (arrow) daughter colonies on PCA washed with sterile tap water f detail of the colonies encircled in e; g, h terminal capitate swellings on the surface of compact colonies i–k conspicuous swellings on aerial mycelium. Scale bars: 500 μm (a, d), 1000 μm (b, c), 5 mm (e), 200 μm (f), 100 μm (g), 20 μm (h).
Figure 5 from: Vohník M, Borovec O, Kolaříková Z, Sudová R, Réblová M (2019) Extensive sampling and high-throughput sequencing reveal Posidoniomyces atricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidonia oceanica. MycoKeys 55: 59-86. https://doi.org/10.3897/mycokeys.55.35682
Figure 5 In vivo root colonisation pattern and in vitro cultural aspects of Posidoniomycesatricolor. a In vivo colonisation on the root surface (arrows) and in the hypodermis (asterisks) of P.oceanicabDSE colonisation on the root surface c germinating microsclerotia stained with trypan blue (arrows) d compact colony developed from microsclerotia (arrow) e surface-sterilised root segments yielding P.atricolor compact colonies (black arrows), sometimes with substrate mycelium (white arrows) f compact colonial morphotype g mycelial colonial morphotype h mycelial morphotype developing from microsclerotia (arrows) in transversal section. Scale bars: 20 μm (a, b), 50 μm (c), 100 μm (d), 200 μm (f, h), 500 μm (g).
Figure 2 from: Vohník M, Borovec O, Kolaříková Z, Sudová R, Réblová M (2019) Extensive sampling and high-throughput sequencing reveal Posidoniomyces atricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidonia oceanica. MycoKeys 55: 59-86. https://doi.org/10.3897/mycokeys.55.35682
Figure 2 Map of the Mediterranean Sea with location of our 32 sampling sites. For further details see Table 1.
Figure 4 from: Vohník M, Borovec O, Kolaříková Z, Sudová R, Réblová M (2019) Extensive sampling and high-throughput sequencing reveal Posidoniomyces atricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidonia oceanica. MycoKeys 55: 59-86. https://doi.org/10.3897/mycokeys.55.35682
Figure 4 Phylogram and map showing a distribution pattern of Posidoniomycesatricolor. a Phylogram generated from maximum likelihood analysis based on ITS sequence data for Posidoniomycesatricolor and representatives of the Aigialaceaeb map of the Mediterranean Sea with our 32 sampling sites. Sites in blue, orange, violet and green colour indicate locations of P.atricolor strains with corresponding mutations in ITS2 sequences.
Figure 3 from: Vohník M, Borovec O, Kolaříková Z, Sudová R, Réblová M (2019) Extensive sampling and high-throughput sequencing reveal Posidoniomyces atricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidonia oceanica. MycoKeys 55: 59-86. https://doi.org/10.3897/mycokeys.55.35682
Figure 3 Phylogram generated from maximum likelihood analysis based on combined nucLSU, nucSSU and RPB2 sequence data for Posidoniomycesatricolor and the Aigialaceae. Species names given in bold are type species. The ex-type of the taxonomic novelty is in bold and blue. An asterisk (*) indicates branches with ML BS = 100% and PP values = 1.0. Branch support of nodes ≥ 70 % ML BS and ≥ 0.90 PP is indicated above or below branches.
Figure 1 from: Vohník M, Borovec O, Kolaříková Z, Sudová R, Réblová M (2019) Extensive sampling and high-throughput sequencing reveal Posidoniomyces atricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidonia oceanica. MycoKeys 55: 59-86. https://doi.org/10.3897/mycokeys.55.35682
Figure 1 The dominant Mediterranean seagrass Posidoniaoceanica. a Overall appearance, note dense branched root system of the seagrass (encircled) bPosidoniaoceanica growing on an approx. 1.5 m thick layer of matte c typical habitat of the dominant Mediterranean seagrass, note the layer of shed seagrass leaves on the seabed.
Supplementary material 1 from: Vohník M, Borovec O, Kolaříková Z, Sudová R, Réblová M (2019) Extensive sampling and high-throughput sequencing reveal Posidoniomyces atricolor gen. et sp. nov. (Aigialaceae, Pleosporales) as the dominant root mycobiont of the dominant Mediterranean seagrass Posidonia oceanica. MycoKeys 55: 59-86. https://doi.org/10.3897/mycokeys.55.35682
: Data type: species data
Figure 8 from: Dai D-Q, Wijayawardene NN, Tang L-Z, Liu C, Han L-H, Chu H-L, Wang H-B, Liao C-F, Yang E-F, Xu R-F, Li Y-M, Hyde KD, Bhat DJ, Cannon PF (2019) Rubroshiraia gen. nov., a second hypocrellin-producing genus in Shiraiaceae (Pleosporales). MycoKeys 58: 1-26. https://doi.org/10.3897/mycokeys.58.36723
Figure 8 Hypocrella bambusae (K(M)52469, isotype, images are accredited to the Royal Botanic Gardens, Kew) A, C fruiting bodies on inflorescence of bamboo B vertical section of stromata showing the perithecia locating D herbarium envelope E filiform ascospores F asci with caps (Staining by cotton blue). Scale bars: 5 mm (A), 200 μm (B), 2 mm (C), 20 μm (E, F).
Figure 7 from: Dai D-Q, Wijayawardene NN, Tang L-Z, Liu C, Han L-H, Chu H-L, Wang H-B, Liao C-F, Yang E-F, Xu R-F, Li Y-M, Hyde KD, Bhat DJ, Cannon PF (2019) Rubroshiraia gen. nov., a second hypocrellin-producing genus in Shiraiaceae (Pleosporales). MycoKeys 58: 1-26. https://doi.org/10.3897/mycokeys.58.36723
Figure 7 Rubroshiraia bambusae (HKAS102255, holotype) A fruiting bodies B, C surface of ascostromata showing the openings of ostiole D vertical section of ascostromata E, F vertical section of locule G peridium of locule H asci and pseudoparaphyses I asci and asci ocular chamber J ascospores K, L immature asci. Scale bars: 1 cm (A), 25 mm (B), 2 mm (C, D), 500 μm (E, F), 200 μm (G), 50 μm (H–L).
Figure 5 from: Dai D-Q, Wijayawardene NN, Tang L-Z, Liu C, Han L-H, Chu H-L, Wang H-B, Liao C-F, Yang E-F, Xu R-F, Li Y-M, Hyde KD, Bhat DJ, Cannon PF (2019) Rubroshiraia gen. nov., a second hypocrellin-producing genus in Shiraiaceae (Pleosporales). MycoKeys 58: 1-26. https://doi.org/10.3897/mycokeys.58.36723
Figure 5 The UV spectrum of the standards and of hypocrellin A and B from the samples (Shiraia bambusicolaHKAS 102253 and Rubroshiraia bambusaeHKAS 102255) were recorded in alcohol at room temperature. HA: hypocrellin A, HB: hypocrellin B.
Figure 6 from: Dai D-Q, Wijayawardene NN, Tang L-Z, Liu C, Han L-H, Chu H-L, Wang H-B, Liao C-F, Yang E-F, Xu R-F, Li Y-M, Hyde KD, Bhat DJ, Cannon PF (2019) Rubroshiraia gen. nov., a second hypocrellin-producing genus in Shiraiaceae (Pleosporales). MycoKeys 58: 1-26. https://doi.org/10.3897/mycokeys.58.36723
Figure 6 Shiraia bambusicolaA–J sexual morph A fruiting bodies (HKAS102253, HKAS102254, HKAS102257, HKAS102261, HKAS102262) B–J photographs from material HKAS102253 B Surface of ascostromata showing the dark openings of ostiole C vertical section of ascostromata D vertical section of locule E pseudoparaphyses F, G asci (G Showing the fissitunicate asci) H–J ascospores K–M asexual morph K vertical section of asexual locules L–M conidia. Scale bars: 2 cm (A), 5 mm (B), 1 mm (C), 100 μm (D, K), 50 μm (F, G), 20 μm (H–J, L, M).
Figure 4 from: Dai D-Q, Wijayawardene NN, Tang L-Z, Liu C, Han L-H, Chu H-L, Wang H-B, Liao C-F, Yang E-F, Xu R-F, Li Y-M, Hyde KD, Bhat DJ, Cannon PF (2019) Rubroshiraia gen. nov., a second hypocrellin-producing genus in Shiraiaceae (Pleosporales). MycoKeys 58: 1-26. https://doi.org/10.3897/mycokeys.58.36723
Figure 4 Hypocrellin A and hypocrellin B HPLC-UV profiles (265 nm) of standards and stromatal HPLC-UV profiles (265 nm) of specimens of Shiraia bambusicola (HKAS 102253) (II) and Rubroshiraia bambusae (HKAS 102255) (III) and DAD spectra of major metabolites.
Figure 3 from: Dai D-Q, Wijayawardene NN, Tang L-Z, Liu C, Han L-H, Chu H-L, Wang H-B, Liao C-F, Yang E-F, Xu R-F, Li Y-M, Hyde KD, Bhat DJ, Cannon PF (2019) Rubroshiraia gen. nov., a second hypocrellin-producing genus in Shiraiaceae (Pleosporales). MycoKeys 58: 1-26. https://doi.org/10.3897/mycokeys.58.36723
Figure 3 Maximum likelihood phylogenetic tree generated from RAxML (GTR+G model), based on combined LSU and ITS sequences data. ML and MP values (MLBP/MPBP) (> 50%), resulting from 1000 bootstrap replicates, are given at the nodes. The original isolate numbers' codes are noted after the species names. The tree is rooted to Pleospora herbarum (CBS 191.86). Ex-type or ex-epitype strains are in bold. Newly generated strains are in red.
Figure 2 from: Dai D-Q, Wijayawardene NN, Tang L-Z, Liu C, Han L-H, Chu H-L, Wang H-B, Liao C-F, Yang E-F, Xu R-F, Li Y-M, Hyde KD, Bhat DJ, Cannon PF (2019) Rubroshiraia gen. nov., a second hypocrellin-producing genus in Shiraiaceae (Pleosporales). MycoKeys 58: 1-26. https://doi.org/10.3897/mycokeys.58.36723
Figure 2 Maximum likelihood phylogenetic tree generated from RAxML (GTR+G model), based on combined LSU, SSU, TEF1 and RPB2 sequences data. ML values (MLBP) (> 50%), resulting from 1000 bootstrap replicates and Bayesian posterior probabilities (BYPP) greater than 0.90, are given at the nodes. The original isolate numbers' codes are noted after the species names. The tree is rooted to Dothidea insculpta (CBS 189.58). Ex-type or ex-epitype strains are in bold. Newly generated strains are in red and the new genus is in yellow background.
Figure 3 from: Gonçalves MFM, Vicente TFL, Esteves AC, Alves A (2019) Neptunomyces aureus gen. et sp. nov. (Didymosphaeriaceae, Pleosporales) isolated from algae in Ria de Aveiro, Portugal. MycoKeys 60: 31-44. https://doi.org/10.3897/mycokeys.60.37931
Figure 3 Phylogenetic relationships of Didymosphaeriaceae species based on ITS and tef1-α sequence data and inferred using the Maximum Likelihood method under the Kimura 2-parameter model. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site and rooted to Cucurbitaria berberidis (CBS 130007) and Coniothyrium palmarum (CBS 400.71). Bootstrap values (> 70%) are shown at the nodes. Ex-type strains are in bold and the isolates from the current study are in blue.
Supplementary material 1 from: Gonçalves MFM, Vicente TFL, Esteves AC, Alves A (2019) Neptunomyces aureus gen. et sp. nov. (Didymosphaeriaceae, Pleosporales) isolated from algae in Ria de Aveiro, Portugal. MycoKeys 60: 31-44. https://doi.org/10.3897/mycokeys.60.37931
: Data type: species data
Figure 4 from: Gonçalves MFM, Vicente TFL, Esteves AC, Alves A (2019) Neptunomyces aureus gen. et sp. nov. (Didymosphaeriaceae, Pleosporales) isolated from algae in Ria de Aveiro, Portugal. MycoKeys 60: 31-44. https://doi.org/10.3897/mycokeys.60.37931
Figure 4 Neptunomyces aureus (MUM 19.38). A, B Colony after 2 weeks at 25 °C on PDA (obverse and reverse) C, D colony after 2 weeks at 25 °C on MEA (obverse and reverse) E, F colony after 2 weeks at 25 °C on OA (obverse and reverse) G, H conidiomata after 1 month at 25 °C on pine needles and PDA. I, J conidiogenous cells K conidia. Scale bars: 2.5 μm.
Figure 2 from: Gonçalves MFM, Vicente TFL, Esteves AC, Alves A (2019) Neptunomyces aureus gen. et sp. nov. (Didymosphaeriaceae, Pleosporales) isolated from algae in Ria de Aveiro, Portugal. MycoKeys 60: 31-44. https://doi.org/10.3897/mycokeys.60.37931
Figure 2 Phylogenetic relationships of Didymosphaeriaceae species based on ITS and tub2 sequence data and inferred using the Maximum Likelihood method under the Kimura 2-parameter model. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site and rooted to Cucurbitaria berberidis (CBS 130007) and Coniothyrium palmarum (CBS 400.71). Bootstrap values (> 70%) are shown at the nodes. Ex-type strains are in bold and the isolates from the current study are in blue.
Figure 1 from: Gonçalves MFM, Vicente TFL, Esteves AC, Alves A (2019) Neptunomyces aureus gen. et sp. nov. (Didymosphaeriaceae, Pleosporales) isolated from algae in Ria de Aveiro, Portugal. MycoKeys 60: 31-44. https://doi.org/10.3897/mycokeys.60.37931
Figure 1 Phylogenetic relationships of Didymosphaeriaceae species based on ITS sequence data and inferred using the Maximum Likelihood method under the Kimura 2-parameter model. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site and rooted to Cucurbitaria berberidis (CBS 130007) and Coniothyrium palmarum (CBS 400.71). Bootstrap values (> 70%) are shown at the nodes. Ex-type strains are in bold and the isolates from the current study are in blue.
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