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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes
GEO Series GSE296626. Homo sapiens. 36 samples. Type: Other.
Single-cell and spatial transcriptomics of vulvar lichen sclerosus reveal multi- compartmental alterations in gene expression and signaling cross-talk
GEO Series GSE274837. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease
GEO Series GSE308007. Homo sapiens. 31 samples. Type: Expression profiling by high throughput sequencing.
Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics]
GEO Series GSE307586. Homo sapiens. 38 samples. Type: Other.
Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression
GEO Series GSE244014. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma
GEO Series GSE300147. Homo sapiens. 18 samples. Type: Other.
Spatial transcriptomic molecular characterization of pig dorsal root ganglion neurons [Visium]
GEO Series GSE263465. Sus scrofa. 28 samples. Type: Other.
Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples
GEO Series GSE221571. Mus musculus. 14 samples. Type: Other.
Spatial Transcriptomics of Joint-Draining Popliteal Lymph Nodes from Wild-type and TNF-Tg Mice with Early and Advanced Inflammatory-Erosive Arthritis
GEO Series GSE195598. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics [human snRNA-seq]
GEO Series GSE264393. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic analysis of Gastric adenocarcinoma
GEO Series GSE245704. Homo sapiens. 1 samples. Type: Other.
An image-based transcriptomic atlas of the mouse gut reveals spatial, regional, and microbiota-dependent fine-tuning
GEO Series GSE297799. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver
GEO Series GSE247128. Homo sapiens. 19 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of the early developing mouse cerebral cortex disentangles the spatial and temporal components of neuronal fate acquisition
GEO Series GSE161605. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC
GEO Series GSE278694. Homo sapiens. 88 samples. Type: Other; Expression profiling by high throughput sequencing.
Spatial transcriptomics of 12 tumor tissues from colorectal cancer
GEO Series GSE283052. Homo sapiens. 12 samples. Type: Other.
Spatial transcriptomes of iron-deficient and cadmium-stressed rice
GEO Series GSE40549. Oryza sativa. 39 samples. Type: Expression profiling by array.
INFLAMMATION-INDUCED SENESCENT-LIKE GLIA REWIRE CELLULAR NETWORKS IN MULTIPLE SCLEROSIS [Spatial transcriptomic]
GEO Series GSE277435. Homo sapiens. 12 samples. Type: Other.
Spatial transcriptomics of de novo NEPC and ARPC
GEO Series GSE230282. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Zika virus co-opts miRNA networks to persist in placental microenvironments detected by spatial transcriptomics
GEO Series GSE205632. Homo sapiens; Mus musculus. 17 samples. Type: Other; Non-coding RNA profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.