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228
datasets available to search
ShareScore release 0.9.0
Dataset results
228 results for “light responsive”
RNA-seq analysis of the transcriptional response to blue and red light in the extremophilic red alga, Cyanidioschyzon merolae
GEO Series GSE83828. Cyanidioschyzon merolae. 8 samples. Type: Expression profiling by high throughput sequencing.
Changs in Histone 3 Lysine 9 Acetylation (H3K9ac) in Arabidopsis seedlings in response to light
GEO Series GSE181432. Arabidopsis thaliana. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Root development and responses are alerted by light
GEO Series GSE68093. Arabidopsis thaliana. 6 samples. Type: Expression profiling by array.
Expression data of Arabidopsis thaliana (Ler accession) phytochrome phyABCDE quintuple mutant and phyABDE quadruple mutant in response to red light, and their comparison to WT expression data
GEO Series GSE31587. Arabidopsis thaliana. 22 samples. Type: Expression profiling by array.
MerR and ChrR mediate blue light induced photo-oxidative stress response at the transcriptional level in Vibrio cholerae
GEO Series GSE79911. Vibrio cholerae O1 biovar El Tor str. N16961. 14 samples. Type: Expression profiling by high throughput sequencing.
The light-responsive chromatin accessibility landscape in rice
GEO Series GSE303225. Oryza sativa. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The redox-sensitive regulatory module of cyclophilin 20-3, 2-cysteine peroxiredoxin and cysteine synthase in the high light acclimation response in Arabidopsis thaliana
GEO Series GSE94327. Arabidopsis thaliana. 40 samples. Type: Expression profiling by array.
Light activation of the sigmaB-mediated general stress-response of Bacillus subtilis
GEO Series GSE19464. Bacillus subtilis; Bacillus subtilis subsp. subtilis str. 168. 16 samples. Type: Expression profiling by array.
Responses of the Rhodobacter sphaeroides Transcriptome to Blue Light
GEO Series GSE1480. Cereibacter sphaeroides; Cereibacter sphaeroides 2.4.1. 9 samples. Type: Expression profiling by array.
Chromochloris zofingiensis response to high light
GEO Series GSE92514. Chromochloris zofingiensis. 44 samples. Type: Expression profiling by high throughput sequencing.
The retinal transcriptional response to light damage
GEO Series GSE10528. Mus musculus. 6 samples. Type: Expression profiling by array.
Expression data from Arabidopsis thaliana accessions Col-0, Ts-1 and Ga-0 in response to high light stress
GEO Series GSE115051. Arabidopsis thaliana. 33 samples. Type: Expression profiling by array.
Organ-specific light-responsive gene expression profiling assay using 18kA and 18kB soybean cDNA microarrays
GEO Series GSE30408. Glycine max. 24 samples. Type: Expression profiling by array.
Deep sequencing of wheat sRNA transcriptome reveals distinct temporal expression pattern of miRNAs in response to heat, light and UV
GEO Series GSE83738. Triticum aestivum. 72 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Transcriptional response of Arabidopsis seedlings to light
GEO Series GSE181167. Arabidopsis thaliana. 9 samples. Type: Expression profiling by high throughput sequencing.
Light quantity impacts early response to cold and cold acclimation in young leaves of Arabidopsis
GEO Series GSE278942. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.
Interaction between the light environment and the Arabidopsis wound response
GEO Series GSE13803. Arabidopsis thaliana. 12 samples. Type: Expression profiling by array.
RNA-seq analysis of the transcriptional response to blue and red light in the extremophilic red alga, Cyanidioschyzon merolae
GEO Series GSE67303. Cyanidioschyzon merolae strain 10D. 4 samples. Type: Expression profiling by high throughput sequencing.
Light has a principal role in the Arabidopsis transcriptomic response to the spaceflight environment
The Characterizing Arabidopsis Root Attractions (CARA) spaceflight experiment provides comparative transcriptome analyses of plants grown in both light and dark conditions within the same spaceflight. CARA compared three genotypes of Arabidopsis grown in ambient light and in the dark on board the International Space Station (ISS); Col-0, Ws, and phyD, a phytochrome D mutant in the Col-0 background. In all genotypes, leaves responded to spaceflight with a higher number of differentially expressed genes (DEGs) than root tips, and each genotype displayed distinct light / dark transcriptomic patterns that were unique to the spaceflight environment. The Col-0 leaves exhibited a substantial dichotomy, with ten-times as many spaceflight DEGs exhibited in light-grown plants versus dark-grown plants. Although the total number of DEGs in phyD leaves is not very different from Col-0, phyD altered the manner in which light-grown leaves respond to spaceflight, and many genes associated with the physiological adaptation of Col-0 to spaceflight were not represented. This result is in contrast to root tips, where a previous CARA study showed that phyD substantially reduced the number of DEGs. There were few DEGs, but a series of space-altered gene categories, common to genotypes and lighting conditions. This commonality indicates that key spaceflight genes are associated with signal transduction for light, defense, and oxidative stress responses. However, these key signaling pathways enriched from DEGs showed opposite regulatory direction in response to spaceflight under light and dark conditions, suggesting a complex interaction between light as a signal, and light-signaling genes in acclimation to spaceflight.
Anthocyanin transcriptional profile and pigmentation pattern in the purple tomato fruit in response to light
GEO Series GSE235565. Solanum lycopersicum. 24 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.