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890
datasets available to search
ShareScore release 0.9.0
Dataset results
890 results for “nucleosome”
Dnmt1-Independent CG Methylation Contributes to Nucleosome Positioning in Diverse Eukaryotes
GEO Series GSE46692. Bathycoccus prasinos; Fragilariopsis cylindrus; Phaeodactylum tricornutum; Emiliania huxleyi; Micromonas pusilla; Aureococcus anophagefferens; Ostreococcus sp. 'lucimarinus'; Cryptococcus neoformans; Leishmania major; Thalassiosira pseudonana; Cyanidioschyzon merolae. 26 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Gcn5-mediated histone acetylation governs nucleosome dynamics in spermiogenesis [ATAC-seq]
GEO Series GSE134825. Mus musculus. 34 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Nucleosome exchange in budding yeast
GEO Series GSE157402. Saccharomyces cerevisiae. 351 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Nucleosome positioning in A549 cells before/after NME2 induction
GEO Series GSE40363. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by genome tiling array.
DDM1/Lsh remodelers allow methylation of DNA wrapped in nucleosomes
GEO Series GSE96994. Arabidopsis thaliana. 15 samples. Type: Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Third-party reanalysis.
ORC precisely positions nucleosomes at origins of replication
GEO Series GSE16926. Saccharomyces cerevisiae. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide nucleosome position data for 12 yeast species
GEO Series GSE22211. Nakaseomyces glabratus; Kluyveromyces lactis; Saccharomyces mikatae; Lachancea kluyveri NRRL Y-12651; Saccharomyces bayanus; Yarrowia lipolytica; Naumovozyma castellii; Lachancea waltii; Saccharomyces cerevisiae; Saccharomyces paradoxus; Debaryomyces hansenii; Candida albicans. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The TRIPLE PHD FINGERS proteins are required for SWI/SNF complex-mediated +1 nucleosome positioning and transcription start site selection in Arabidopsis [MNase-seq]
GEO Series GSE205110. Arabidopsis thaliana. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DNA Methylation-Based High-Resolution Mapping of Long-Distance Chromosomal Interactions in Nucleosome-Depleted Regions
GEO Series GSE242400. Saccharomyces cerevisiae. 82 samples. Type: Other; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Genome wide nucleosome specifity and function of chromatin remodellers in embryonic stem cells [Chd8]
GEO Series GSE64784. Mus musculus. 6 samples. Type: Expression profiling by array.
The Asymmetric Distribution of RNAPII and Nucleosomes on Replicated Daughter Genomes is caused by Differences in Replication Timing between the Lagging and the Leading Strand [RNA-seq]
GEO Series GSE160265. Saccharomyces cerevisiae. 6 samples. Type: Expression profiling by high throughput sequencing.
Nucleosome fragility is associated with future transcriptional response to developmental cues and stress in C. elegans
GEO Series GSE79567. Caenorhabditis elegans. 24 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Hypersensitive Nucleosomes in Chromatin Are Intrinsic to the Structure of Active, Tissue-Specific Enhancers [ChIP-exo]
GEO Series GSE57556. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ACF chromatin remodeling complex mediates stress-induced depressive-like behavior through nucleosome repositioning and transcriptional regulation.
GEO Series GSE54263. Mus musculus. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Psh1-mediated Proteolysis Prevents the Budding Yeast Centromeric Histone Variant from Mislocalizing to Promoter Nucleosomes
GEO Series GSE69696. Saccharomyces cerevisiae. 42 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Nucleosome dynamics in human colorectal cancer specimens reveal activation of a CNOT3-regulated pathway of embryonic stem cell self-renewal
GEO Series GSE66216. Homo sapiens. 45 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Changes in nucleosome occupancy associated with metabolic alterations in aged mammalian liver [ChIP-seq]
GEO Series GSE60393. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Nucleosome positioning changes during human embryonic stem cell differentiation
GEO Series GSE46467. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by array.
Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells [BLISS human]
GEO Series GSE150016. Homo sapiens. 10 samples. Type: Other.
Relationship between nucleosome positioning and DNA methylation
GEO Series GSE21673. Arabidopsis thaliana; Homo sapiens. 6 samples. Type: Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Genome binding/occupancy profiling by genome tiling array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.