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271
datasets available to search
ShareScore release 0.9.0
Dataset results
271 results for “scATAC”
Heterochronic transcription factor expression drives cone-dominant retina development in 13-lined ground squirrels. [scATAC-Seq]
GEO Series GSE303986. Ictidomys tridecemlineatus. 23 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Stem cell decoupling underlies impaired lymphoid development during aging [scATAC-seq]
GEO Series GSE228943. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Dynamic single-cell regulomes characterize human peripheral blood ILC subpopulations [scATAC-seq]
GEO Series GSE225167. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multiple subpopulations in medullary thymic epithelial cells are regulated by Aire with distinctive modes of gene regulations [scRNA-Seq and scATAC-Seq]
GEO Series GSE205560. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Three-dimensional chromatin re-organization during muscle stem cell aging [scATAC-seq]
GEO Series GSE214046. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Bone Marrow Stromal Cells Induce Chromatin Remodeling in Multiple Myeloma Cells Leading to Transcriptional Changes [Multiome (10X Genomics) - scRNA-Seq & scATAC-Seq]
GEO Series GSE263178. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell analysis of the epigenomic and transcriptional landscape of innate immunity to seasonal and adjuvanted pandemic influenza vaccination in humans (TIV_scATAC-seq)
GEO Series GSE165906. Homo sapiens. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single Nucleus ATAC-Seq Multiomic Profiling Reveals Age-Dynamic Regulation of Host Genes Associated with SARS-CoV-2 Infection [scATAC-Seq]
GEO Series GSE161381. Homo sapiens. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
An FXR-Casp6 axis-mediated bile acid/gut microbiota sensing modulates neonatal β-cell mass expansion [scATAC-Seq]
GEO Series GSE241406. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single cell analysis of transcriptome and open chromatin reveals the dynamics of hair follicle stem cell aging [scATAC-Seq]
GEO Series GSE227783. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
AS01-adjuvanted vaccine promotes functional and epigenetic modifications in monocytes [scATAC-seq]
GEO Series GSE244792. Homo sapiens. 31 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Thymic epithelial cells co-opt lineage-defining transcription factors to eliminate autoreactive T cells [scATAC-seq]
GEO Series GSE194233. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
KDM6A Epigenetically Regulates Subtype Plasticity in Small Cell Lung Cancer (scatac)
GEO Series GSE215828. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Estrogen-triggered Monkey Multi-Organ Cell Atlas [scATAC-seq]
GEO Series GSE243769. Macaca fascicularis. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Gene regulatory basis of bystander activation in CD8+ T cells (scATAC-seq)
GEO Series GSE218223. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mapping genotypes to chromatin accessibility profiles in single cells [scATAC-seq; Pt01-19;Pt-02 DOGMAseq]
GEO Series GSE203251. Homo sapiens. 28 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell chromatin accessibility data using scATAC-seq
GEO Series GSE74310. Homo sapiens. 576 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Temporal evolution of cellular heterogeneity during the progression to advanced, AR-negative prostate cancer [scATAC-seq]
GEO Series GSE151425. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cell of origin epigenetic priming determines susceptibility to Tet2 oncogenic mutation [scATAC-seq]
GEO Series GSE227314. Mus musculus. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell epigenetic, transcriptional, and protein states of HIV-1-infected cells [scATAC-seq]
GEO Series GSE239915. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.