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208
datasets available to search
ShareScore release 0.9.0
Dataset results
208 results for “spatial association”
Digital spatial profiling revealed the mechanism involved in the progression of affected glomeruli in ANCA associated glomerulonephritis [RNA-Seq]
GEO Series GSE192994. Homo sapiens. 47 samples. Type: Expression profiling by high throughput sequencing.
Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells
GEO Series GSE307895. Homo sapiens. 14 samples. Type: Other.
Spatial transcriptomics analysis of mouse liver tissue during Alcohol-associated liver disease development and resolution
GEO Series GSE304111. Mus musculus. 1 samples. Type: Other.
Scar-associated endothelial-stellate cellular crosstalk drives fibrosis resolution in MASH [Spatial Transcriptomics]
GEO Series GSE306327. Mus musculus. 2 samples. Type: Other.
Deciphering hypoxia related glioblastoma-associated macrophages and predicting prognostic markers by single-cell, spatially-resolved transcriptomics and experimental analysis
GEO Series GSE251908. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer
GEO Series GSE311294. Homo sapiens. 5 samples. Type: Other.
Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics]
GEO Series GSE273378. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing; Other.
Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension
GEO Series GSE277936. Mus musculus. 4 samples. Type: Other.
Gene Expression Profiles Associated with Mφ Spatial Aggregation for HCC
GEO Series GSE276428. Homo sapiens. 19 samples. Type: Expression profiling by array.
Spatial gene expression profiling unveils immuno-oncogenic programs of NF1-associated peripheral nerve sheath tumor progression
GEO Series GSE239561. Homo sapiens. 35 samples. Type: Expression profiling by array.
Spatial transcriptomic profiling of the lung tissues from a patient with recurrent anti-synthetase syndrome associated interstitial lung disease after bilateral lung transplantation and one untreated
GEO Series GSE286227. Homo sapiens. 2 samples. Type: Other.
Dataset related to article"Integrating single-cell and spatial transcriptomics to elucidate the crosstalk between cancer-associated fibroblasts and cancer cells in hepatocellular carcinoma with spleen-deficiency syndrome"
<p>Most patients with hepatocellular carcinoma (HCC) in China have been diagnosed with spleen deficiency syndrome (SDS), which accelerates the progression of HCC by disrupting the tumor microenvironment (TME) homeostasis. However, the underlying mechanism remains to be explored. By integrating single-cell and spatial transcriptomics, we found that the crosstalk between CAFs and cancer cells is crucial for the tumor-promoting effect of SDS. CAFs recruited by HCC via PDGFA may lead to ECM remodeling through activation of the TGF-β pathway, thereby forming a physical barrier to block immune cell infiltration under SDS. </p>
DS_WD_Childrens Spatial Numeric Associations On Three Axes_v1.0
<p>Raw data sets in long format .csv from experiments 1a and 1b Childrens Spatial numeric associations on three axes. </p>
SCALABLE - Social-ecological pathways and gender perspectives for future conservation of biocultural mountain agro-ecosystems - Deliverable 2.1: Spatially explicit database on biocultural practices and their associated ecosystem services
<p>This dataset contains the results from participatory mapping workshops with local communities in the municipality of Abrucena, in Almería, Spain. Participatory workshops were carried out divided by gender in different days. In addition, within each workshop, participants were dividing in two different groups. Participants were asked to: a) map past biocultural diversity elements in the region (i.e., practices, knowledge, and traditions); and b) map current biocultural diversity elements (i.e., practices, knowledge and traditions) in the region.</p> <p>In this upload you can find 4 files (shapefiles format):</p> <p>1- Spatial database of past (1950) biocultural diversity elements mapped by women: this file contains the dataset with three different biocultural diversity elements differentiated (TypeBCD): practices, knowledge, traditions.</p> <p>2- Spatial database of current (2022) biocultural diversity elements mapped by women: this file contains the dataset with three different biocultural diversity elements differentiated (TypeBCD): practices, knowledge, traditions.</p> <p>3- Spatial database of past (1950) biocultural diversity elements mapped by men: this file contains the dataset with three different biocultural diversity elements differentiated (TypeBCD): practices, knowledge, traditions.</p> <p>4- Spatial database of current (2022) biocultural diversity elements mapped by men: this file contains the dataset with three different biocultural diversity elements differentiated (TypeBCD): practices, knowledge, traditions.</p>
Single-cell transcriptome combined with spatial transcriptome to investigate the molecular mechanism associated with autophagy of clear renal cell carcinoma
GEO Series GSE304466. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
A Spatially-Defined Metastasis-Associated Microglia Subset Promotes Brain Metastasis Outgrowth through Cx3cr1-Mediated Interferon Response
GEO Series GSE119229. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-nucleus and spatial transcriptome identify brain landscape of gene regulatory networks associated with behavioral maturation in honeybees
GEO Series GSE295620. Apis mellifera. 59 samples. Type: Expression profiling by high throughput sequencing.
Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Visium]
GEO Series GSE276934. Homo sapiens. 1 samples. Type: Other.
Spatial genome organization is associated with nematode programmed DNA elimination [Hi-C Parascaris univalens]
GEO Series GSE315650. Parascaris univalens. 5 samples. Type: Other.
Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC]
GEO Series GSE274673. Homo sapiens. 6 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.