Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,620
datasets available to search
ShareScore release 0.9.0
Dataset results
2,620 results for “Molecular Phylogeny”
Revisiting the phylogeny of phylum Ctenophora: a molecular perspective
<p>Raw data used in 'Revisiting the phylogeny of phylum Ctenophora: a molecular perspective' study.</p>
FIGURE 2 in Molecular phylogeny of some genera of Pamphagidae (Acridoidea, Orthoptera) from China based on mitochondrial 16S rDNA sequences
FIGURE 2. Minimum Evolution (ME) Bootstrap consensus tree from 13 species of Pamphagidae.
FIGURE 1 in Molecular phylogeny of some genera of Pamphagidae (Acridoidea, Orthoptera) from China based on mitochondrial 16S rDNA sequences
FIGURE 1. Neighbor Joining (NJ) phylogenetic tree of 13 species of Pamphagidae.
FIGURE 2. Penaeini ultrametric tree. Below a in Molecular phylogeny and divergence time estimates of Penaeid Shrimp Lineages (Decapoda: Penaeidae)
FIGURE 2. Penaeini ultrametric tree. Below a geological time-scale is shown.
Supplementary material 1 from: Yahara T, Hirota SK, Fujii S, Kokami Y, Fuse K, Sato H, Tagane S, Suyama Y (2023) Molecular phylogeny and taxonomy of Hosta (Asparagaceae) on Shikoku Island, Japan, including five new species, one new subspecies, and two new status assignments. PhytoKeys 235: 137-187. https://doi.org/10.3897/phytokeys.235.99140
20 DNA samples and voucher specimens from 70 localities for 30 taxa of Hosta in Japan
Supplementary material 2 from: Yahara T, Hirota SK, Fujii S, Kokami Y, Fuse K, Sato H, Tagane S, Suyama Y (2023) Molecular phylogeny and taxonomy of Hosta (Asparagaceae) on Shikoku Island, Japan, including five new species, one new subspecies, and two new status assignments. PhytoKeys 235: 137-187. https://doi.org/10.3897/phytokeys.235.99140
Sample sets
Figure 6 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 6 Morphological characteristics of Macrobrachium rostrolevatus sp. nov. (A, B, D–I ovigerous female holotype CUMZ MP00323 C ovigerous female specimen MUMNH MP00338.1) A lateral view B carapace C rostral variation D epistome E second pereiopod F teeth between fingers G third pereiopod H uropod and I movable spine at uropodal diaeresis. Scale bars: 1 mm.
Figure 5 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 5 Morphological characteristics of Macrobrachium panhai sp. nov. (A, F ovigerous female paratype MUMNH MP00303 B–E, G–H ovigerous female holotype CUMZ MP00302) A lateral view B carapace C epistome D second pereiopod E teeth between fingers F third pereiopod G uropod and H movable spine at uropodal diaeresis. Scale bars: 1 mm.
Figure 4 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 4 Morphological characteristics of Macrobrachium lanchesteri (A female topotype MUMNH MP00218 B–H female topotype MUMNH MP00216.1) A lateral view B carapace C epistome D second pereiopod E teeth between fingers F third pereiopod G uropod and H movable spine at uropodal diaeresis. Scale bars: 1 mm.
Figure 2 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 2 Phylogenetic tree based on a concatenation of COI and 16S genes. Nodes of a phylogenetic tree marked with a black circle indicate statistical support from both ML and BI (≥ 70 bootstrap values and ≥ 0.95 posterior probability scores). A white circle indicates statistical support for either ML or BI. An asterisk indicates the topotype in M. lanchesteri and holotype in the new species.
Figure 3 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 3 Living habit of specimens of three Macrobrachium species A, BM. lanchesteri from Bang Khiat, Singhanakhon, Songkhla, Thailand C, DM. rostrolevatus sp. nov. from Bueng Khong Long, Bueng Kan, Thailand EM. panhai sp. nov. from Sri Nakarin Dam, Tha Kradan, Si Sawat, Kanchanaburi, Thailand. Scale bars: 1 cm.
Figure 1 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 1 Distribution map of three Macrobrachium species in Thailand. A colour symbol indicates the locality of specimen used in phylogenetic analyses. A transparent symbol indicates the locality of specimen examined based on morphology. Equivalent symbols, whether coloured or not, indicate the same species.
Figure 2 from: Fan Q, Yang T, Li H, Wang X-M, Liao H-F, Shen P-H, Yang Z-L, Zeng W-B, Wang Y-B (2024) Molecular phylogeny and morphology reveal two new entomopathogenic species of Ophiocordyceps (Ophiocordycipitaceae, Hypocreales) parasitic on termites from China. MycoKeys 103: 1-24. https://doi.org/10.3897/mycokeys.103.116153
Figure 2 Ophiocordyceps longistipesA, B stromata of fungus arising from termites C fertile part D perithecia E colony on PDA (obverse and reverse) F, G ascospores H, I asci J–L conidiogenous cells and conidia. Scale bars: 1 cm (A, B, E); 2 mm (C); 100 µm (D); 20 µm (F–L).
Figure 1 from: Fan Q, Yang T, Li H, Wang X-M, Liao H-F, Shen P-H, Yang Z-L, Zeng W-B, Wang Y-B (2024) Molecular phylogeny and morphology reveal two new entomopathogenic species of Ophiocordyceps (Ophiocordycipitaceae, Hypocreales) parasitic on termites from China. MycoKeys 103: 1-24. https://doi.org/10.3897/mycokeys.103.116153
Figure 1 Phylogenetic tree based on the combined dataset of nrSSU, nrLSU, tef-1α, rpb1, rpb2, and ITS showing the relationship of two new species on termites from China with other Ophiocordyceps species. Values at the nodes before and after the backslash are BI posterior probabilities (BI-PP greater than 0.60) and ML bootstrap proportions (ML-BP greater than 70%), respectively. New species described in this paper are shown in bold red.
Figure 3 from: Fan Q, Yang T, Li H, Wang X-M, Liao H-F, Shen P-H, Yang Z-L, Zeng W-B, Wang Y-B (2024) Molecular phylogeny and morphology reveal two new entomopathogenic species of Ophiocordyceps (Ophiocordycipitaceae, Hypocreales) parasitic on termites from China. MycoKeys 103: 1-24. https://doi.org/10.3897/mycokeys.103.116153
Figure 3 Ophiocordyceps globiperitheciataA stromata of fungus arising from termites B sterile tip and fertile part C fertile part D perithecia E–G asci H–J ascospores. Scale bars: 1 cm (A); 2 mm (B); 500 µm (C); 50 µm (D); 20 µm (E–J).
Figure 6 from: Hussain S, Al-Kharousi M, Al-Maqbali D, Al-Owaisi AA, Velazhahan R, Al-Yahya'ei MN, Al-Sadi AM (2024) Two new species of Hymenagaricus (Agaricales, Agaricaceae) from Oman, based on morphology and molecular phylogeny. MycoKeys 105: 1-19. https://doi.org/10.3897/mycokeys.105.113591
Figure 6 Light microscopy of anatomical features of Hymenagaricus parvulus (based on holotype collection JRZ-22-004) A basidiospores B basidia C cheilocystidia D annulus E pellicle structure F veil elements. Scale bars: 5 µm (A); 10 µm (B, C); 15 µm (D–F).
Figure 5 from: Hussain S, Al-Kharousi M, Al-Maqbali D, Al-Owaisi AA, Velazhahan R, Al-Yahya'ei MN, Al-Sadi AM (2024) Two new species of Hymenagaricus (Agaricales, Agaricaceae) from Oman, based on morphology and molecular phylogeny. MycoKeys 105: 1-19. https://doi.org/10.3897/mycokeys.105.113591
Figure 5 Basidiomata of Hymenagaricus parvulus (based on holotype collection JRZ-22-004) A mature and young basidiomata B mature basidimata.
Figure 2 from: Hussain S, Al-Kharousi M, Al-Maqbali D, Al-Owaisi AA, Velazhahan R, Al-Yahya'ei MN, Al-Sadi AM (2024) Two new species of Hymenagaricus (Agaricales, Agaricaceae) from Oman, based on morphology and molecular phylogeny. MycoKeys 105: 1-19. https://doi.org/10.3897/mycokeys.105.113591
Figure 2 Basidiomata of Hymenagaricus wadijarzeezicusA–C holotype collection (JRZ2-22-013) D, E NHZ-22-019 F young fruiting bodies where the cap is entirely covered by pellicle represented by arrows (JRZ2-22-015) G context changed into pinkish on cutting, the arrow represents the root-like rhizoid (JRZ2-22-015). Scale bars: 20 mm.
Figure 1 from: Hussain S, Al-Kharousi M, Al-Maqbali D, Al-Owaisi AA, Velazhahan R, Al-Yahya'ei MN, Al-Sadi AM (2024) Two new species of Hymenagaricus (Agaricales, Agaricaceae) from Oman, based on morphology and molecular phylogeny. MycoKeys 105: 1-19. https://doi.org/10.3897/mycokeys.105.113591
Figure 1 Maximum Likelihood phylogeny of Hymenagaricus and Heinemannomyces, based on combined ITS-28S sequence data, with Agaricus campestris as the outgroup taxon. Values above the node represent ML bootstrap percentages and BI posterior probabilities; the new species are represented in bold fonts.
Figure 4 from: Hussain S, Al-Kharousi M, Al-Maqbali D, Al-Owaisi AA, Velazhahan R, Al-Yahya'ei MN, Al-Sadi AM (2024) Two new species of Hymenagaricus (Agaricales, Agaricaceae) from Oman, based on morphology and molecular phylogeny. MycoKeys 105: 1-19. https://doi.org/10.3897/mycokeys.105.113591
Figure 4 Line drawings of anatomical features of Hymenagaricus wadijarzeezicus (based on holotype collection JRZ2-22-013) A basidiospores B basidia C cheilocystidia D pellicle structure E annulus F veil elements. Scale bars: 10 µm (A); 15 µm (B–D); 15 µm (E, F).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.