Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

8,071

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

8,071 results for “transcriptome analysis”

Learn how ShareScore rates datasets ↗
geo24/100

Next generation sequencing of MA-10 mouse Leydig tumor cells facilitates quantitative analysis of SINE B2-antisense transcripts with the RNAi system: wild type and Dicer1-knockdown transcriptomes

GEO Series GSE126041. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenSep 2020View details →
geo24/100

Transcriptome analysis of barley root meristem under Al and low pH stress

GEO Series GSE167271. Hordeum vulgare. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2021View details →
geo24/100

In-depth analysis of transcriptomes in ovarian cortical follicles from children and adults reveals interfollicular heterogeneity [RNA-Seq 1]

GEO Series GSE241981. Homo sapiens. 39 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2024View details →
geo24/100

Transcriptome Analysis of Human Hemorrhoids Tissue

GEO Series GSE154650. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2021View details →
geo24/100

Transcriptomic analysis of intestinal mucosa reveals covert condition in celiac patients on gluten free diet

GEO Series GSE145358. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2020View details →
geo24/100

Transcriptome Analysis of Rice Root Heterosis by RNA-Seq

GEO Series GSE41797. Oryza sativa. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2013View details →
geo24/100

Whole transcriptome analysis of HK1EBV exosome-treated fibroblasts.

GEO Series GSE197560. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo24/100

Next Generation Sequencing Facilitates Quantitative Analysis of Transcriptomes of human U2OS cells under mild replication stress by low dose aphidicolin (APH)

GEO Series GSE104465. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2018View details →
geo24/100

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Uhrf1-/- fetal liver hematopoietic stem cell (FL-HSCs) Transcriptomes

GEO Series GSE85450. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2016View details →
geo24/100

Transcriptomic analysis of pro-invasive fibroblasts activation short and long term response

GEO Series GSE81998. Homo sapiens. 16 samples. Type: Expression profiling by array.

openGEO-OpenDec 2016View details →
geo24/100

Next-generation sequencing facilitates quantitative analysis of wild type and Bmp4f/f;Wnt1Cre tooth mesenchyme transcriptomes

GEO Series GSE39918. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2013View details →
geo24/100

Investigating the Mechanism of Neurotoxic Effects of PFAS in Differentiated Neuronal Cells through Transcriptomics and Lipidomics Analysis

GEO Series GSE254408. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2024View details →
geo24/100

Transcriptome analysis of aortic valve tissues from hyperlipidemic and control mice with normal chow diet (chow) or western diet (WD)

GEO Series GSE205587. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo24/100

Transcriptomic analysis of naïve B cells and antigen-specific activated B cells and plasma cells from 4dpi NP-LPS immunized mice [NPLPS_PC]

GEO Series GSE141420. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2019View details →
geo24/100

Stage-specific transcriptome analysis during differentiation from pluripotency to glial restricted progenitor stages

GEO Series GSE117664. Homo sapiens. 27 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2018View details →
geo24/100

RNA-seq Analysis of Wild Type and Ptpn11-deficient cerebellar Transcriptomes

GEO Series GSE87104. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2017View details →
geo24/100

Bulk transcriptomic analysis of normal, premalignant state and tumor mouse models of VAV1-MYOF gene fusion in Peripheral T-Cell Lymphoma

GEO Series GSE166671. Mus musculus. 31 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2021View details →
geo24/100

Transcriptomic Analysis Links the Response of Diverse Hypothalamic Cell Types to Sustained Diabetes Remission Induced by Fibroblast Growth Factor 1 [single-cell RNA-seq]

GEO Series GSE148946. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2020View details →
geo24/100

Domestication causes large-scale effects on gene expression in rainbow trout: Analysis of the muscle transcriptome

GEO Series GSE16901. Coregonus clupeaformis; Osmerus mordax; Oncorhynchus mykiss; Salmo salar; Oncorhynchus tshawytscha. 12 samples. Type: Expression profiling by array.

openGEO-OpenJul 2009View details →
geo24/100

Next-generation sequencing facilitates quantitative analysis of CreAlbMYC and CreAlbScarb2F/FMYC mice liver tissue transcriptomes

GEO Series GSE207671. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2023View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record