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FIGURE 12 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 12. Dorsal view of Aegla rosanae Campos Jr., 1998, male topotype (MZUSP 34369). Bar = 3.0 mm.
FIGURE 11. Aegla paulensis Schmitt, 1942 s in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 11. Aegla paulensis Schmitt, 1942 s. str., male holotype (USNM 80023). A, lateral view of the anterior region of the cephalothorax. B, dorsal view of epibranchial area. C, third and fourth thoracic sternites. D, telson, uropods and sixth abdominal segment. Note in A, the subrostral process (arrow). Bars: A = 2.0 mm. B = 0.50 mm. C = 1.0 mm. D = 3.0 mm.
FIGURE 10 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 10. Dorsal view of Aegla paulensis Schmitt, 1942 s. str., male holotype (USNM 80023). Bar = 3.0 mm.
FIGURE 9 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 9. Types of aeglid uropods used in the descriptions. A, narrow-shaped. B, wide-shaped. Gray lines indicate maximum width of the endopod and the maximum width of the half of the telson.
FIGURE 26. A–B in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 26. A–B, lateral view of the anterior region of the cephalothorax showing the orientation of the rostrum and the elevation of gastric area. A, Aegla paulensis Schmitt, 1942 s. str., male topotype (MZUSP 34367). B, Aegla rosanae Campos Jr., 1998, male topotype (MZUSP 34369). Note in A, gastric area strongly swollen and subrostral process. Bars = 1.0 mm.
FIGURE 6 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 6. Schematic representation of the chela, showing the measurements "a", "b" and "c" of the propodus used to determine the palm height.
FIGURE 7 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 7. Schematic representation of the types of anteromesial region of the Aegla Leach, 1820 third thoracic sternite used in the descriptions. A, tapered. B, truncate. C, Abrupt.
FIGURE 25. A–F in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 25. A–F, dorsal view of cephalothorax and anterior portion of abdomen. A, Aegla paulensis Schmitt, 1942 s. str., male topotype (MZUSP 34367). B, Aegla rosanae Campos Jr., 1998, male topotype (MZUSP 34369). C, Aegla vanini n. sp., male holotype (MZUSP 34371). D, Aegla japi n. sp., male paratype (MZUSP 34375). E, Aegla jaragua n. sp., male paratype (MZUSP 34377). F, Aegla jundiai n. sp., female holotype (MZUSP 13493).
FIGURE 21. Aegla jaragua n in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 21. Aegla jaragua n. sp., male holotype (MZUSP 34376). A, lateral view of the anterior region of the cephalothorax. B, dorsal view of epibranchial area. C, third and fourth thoracic sternites. D, telson, uropods and sixth abdominal segment. Note in A, the subrostral process (arrow). Bars: A, D = 2.0 mm; B = 0.5 mm; C = 1.0 mm.
FIGURE 3 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 3. Schematic representation of the aeglid rostrum in dorsal view showing the terminology and measurements used in the descriptions. RBW, rostral base width. LMR, lateral margin of rostrum (rostral side length).
FIGURE 5 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 5. Types of aeglid palmar crests showing the terminology used in the descriptions. A, rudimentary. B, rectangular. C, disciform. Arrow in C shows the convex inflexion condition.
FIGURE 4 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 4. Schematic representation of the aeglid areola (inner, dotted) and cardiac area (outer, solid line) in dorsal view, showing the terminology and measurements used in the descriptions. "y", "x", anterior and posterior width of the areola, respectively; "h", areola length; "a", "b", anterior and posterior width of the cardiac area, respectively. DLL, TDL, dorsal longitudinal linea and transverse dorsal linea, respectively.
FIGURE 2 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 2. Major cheliped of Aegla paulensis s. str. (male topotype MZUSP 34367) showing the terminology used in the descriptions.
FIGURE 30 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 30. Bayesian tree (TPM2uf+G) for Aegla species based on partial fragment of 16S. Node numbers represent posterior probabilities (values <50% are not shown), and divergence time in millions of years (my); *indicates the calibration points to molecular clock. The clade C proposed by Pérez-Losada et al. (2004) is highlighted in grey. The basin and sub-basin origin of the discussed species in this study are shown after the specific names.
FIGURE 1 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 1. Distribution of the species of Aegla in four main hydrographic basins of southern Brazil: Rio Grande, Rio Tietê (Upper Paraná system), Rio Paraíba do Sul and Ribeira de Iguape. Indications L1 through L7 refer to the locations mentioned under "sampling area" in the Material & Methods section.
FIGURE 24. A–L in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 24. A–L, proximal portion of fifth pereiopod showing coxa and sexual tube of long and narrow type. A–B, Aegla paulensis Schmitt, 1942 s. str., male topotype (MZUSP 34368). C–D, Aegla rosanae Campos Jr., 1998, male topotype (MZUSP 34369). E–F, Aegla vanini n. sp., male paratype (MZUSP 34372). G–H, Aegla japi n. sp., male paratype (MZUSP 34375). I–J, Aegla jaragua n. sp. male paratype (MZUSP 34378). K-L, Aegla jundiai n. sp., male paratype (MZUSP 13490). Bars: A–D, F– H, J = 200 µm; K, L = 100 µm; E, I = 500 µm.
FIGURE 8 in Morphological and molecular data reveal the cryptic diversity among populations of Aegla paulensis (Decapoda, Anomura, Aeglidae), with descriptions of four new species and comments on dispersal routes and conservation status
FIGURE 8. Types of Aegla Leach, 1820 male sexual tubes. A, long and narrow (A. lancinhas Bond-Buckup & Buckup in Santos et al., 2015, MZUSP 34403). B, short and wide (A. leptochela Bond-Buckup & Buckup, 1994, MZUSP 34491).
Data used for submission entitled "Critical Mutation Rate has an Exponential Dependence on Population Size for Eukaryotic-length Genomes with Crossover"
<p>Datasets generated and presented in the submission entitled "Critical Mutation Rate has an Exponential Dependence on Population Size for Eukaryotic-length Genomes with Crossover".</p>
Supplemental Data to: Variation in recombination rate and its genetic determinism in sheep populations
<p>Supplemental Data to reproduce the analysis of</p> <p><strong>Variation in recombination rate and its genetic determinism in sheep (Ovis Aries) populations from combining multiple genome-wide datasets.</strong></p> <p>Morgane Petit*, Jean-Michel Astruc✝, Julien Sarry*, Laurence Drouilhet*, Stéphane Fabre*, Carole Moreno*, Bertrand Servin*</p> <p>*INRA, Génétique, Physiologie et Systèmes d’Elevage, F-31326 Castanet-Tolosan, France</p> <p>✝Institut de l’Elevage, F-31326 Castanet-Tolosan, France</p> <p><strong>Abstract</strong></p> <p>Recombination is a complex biological process that results from a cascade of multiple events during meiosis. Understanding the genetic determinism of recombination can help to understand if and how these events are interacting. To tackle this question, we studied the patterns of recombination in sheep, using multiple approaches and datasets. We constructed male recombination maps in a dairy breed from the south of France (the Lacaune breed) at a fine scale by combining meiotic recombination rates from a large pedigree genotyped with a 50K SNP array and historical recombination rates from a sample of unrelated individuals genotyped with a 600K SNP array. This analysis revealed recombination patterns in sheep similar to other mammals but also genome regions that have likely been affected by directional and diversifying selection. We estimated the average recombination rate of Lacaune sheep at 1.5 cM/Mb, identified about 50,000 crossover hotspots on the genome and found a high correlation between historical and meiotic recombination rate estimates. A genome-wide association study revealed two major loci affecting inter-individual variation in recombination rate in Lacaune, including the <em>RNF212</em> and<em> HEI10</em> genes and possibly 2 other loci of smaller effects including the <em>KCNJ15</em> and <em>FSHR</em> genes. Finally, we compared our results to those obtained previously in a distantly related population of domestic sheep, the Soay. This comparison revealed that Soay and Lacaune males have a very similar distribution of recombination along the genome and that the two datasets can be combined to create more precise male meiotic recombination maps in sheep. Despite their similar recombination maps, we show that Soay and Lacaune males exhibit different heritabilities and QTL effects for inter-individual variation in genome-wide recombination rates.</p> <p> </p>
Dataset for Quantitative Trait Loci Associated with Lodging in Dry Field Peas. Data for PR Population (Carerra x Striker).
<p>Dataset for Quantitative Trait Loci Associated with Lodging in Dry Field Peas. Data for PR Population (Carerra x Striker). Here is data on lodging, height, stem diameter, side branch diameter, and epicotyl diameter for both site years with the PR population.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.