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Figure 3 from: Angyal D, Chávez Solís E, Magana B, Balázs G, Simoes N (2018) Mayaweckelia troglomorpha (Amphipoda, Hadziidae), a new subterranean amphipod species from Yucatán state (Yucatán Peninsula, Mexico). ZooKeys 735: 1-25. https://doi.org/10.3897/zookeys.735.21164
Figure 3 M. troglomorpha sp. n. A detail of head and antenna I and II (♀ allotype) B detail of antenna I with accessory flagellum (♀ allotype) C antenna II peduncle articles and proximal part of flagellum (♀ allotype) D upper lip (♂ holotype) E lower lip (♂ holotype) F left mandible (♀ allotype) G maxilliped (8 mm ♂) H maxilla 1 (♀ allotype) I maxilla II (♀ allotype) J maxilla I outer plate (♂ holotype).
Figure 5 from: Angyal D, Chávez Solís E, Magana B, Balázs G, Simoes N (2018) Mayaweckelia troglomorpha (Amphipoda, Hadziidae), a new subterranean amphipod species from Yucatán state (Yucatán Peninsula, Mexico). ZooKeys 735: 1-25. https://doi.org/10.3897/zookeys.735.21164
Figure 5 M. troglomorpha sp. n., (7 mm ♀), scanning electron micrographs. A gnathopod I propodus; B, gnathopod I palmar corner C gnathopod I propodus posteromedial part D gnathopod I propodus anterodistal seta group E gnathopod I propodus anterior margin seta group F ventrally produced conspicous lobe on gnathopod I merus. Abbreviations: gp1-p = gnathopod I propodus, gp2-p = gnathopod II propodus (A); nst = notched spine teeth (B); pub-s = pubescent setae, h-s = helical medial seta (C); pl-s = plumose seta, s-s = simple seta (D); pl-s = plumose seta (E); cl = conspicous lobe (F).
Figure 2 from: Angyal D, Chávez Solís E, Magana B, Balázs G, Simoes N (2018) Mayaweckelia troglomorpha (Amphipoda, Hadziidae), a new subterranean amphipod species from Yucatán state (Yucatán Peninsula, Mexico). ZooKeys 735: 1-25. https://doi.org/10.3897/zookeys.735.21164
Figure 2 M. troglomorpha sp. n., living specimens. Above: allotype ♀ collected in Cenote Kankirixché; below: individual photographed in its natural habitat during research dive in Cenote Kanún (not collected).
Figure 10 from: Angyal D, Chávez Solís E, Magana B, Balázs G, Simoes N (2018) Mayaweckelia troglomorpha (Amphipoda, Hadziidae), a new subterranean amphipod species from Yucatán state (Yucatán Peninsula, Mexico). ZooKeys 735: 1-25. https://doi.org/10.3897/zookeys.735.21164
Figure 10 Bayesian phylogenetic tree of COI sequences based on the collected Mayaweckelia and Tuluweckelia samples and publicly available hadziid and hyalellid sequences. Hyalella azteca was included as outgroup taxon. Posterior probability values are indicated. Bahadzia jaraguensis and H. azteca sequences are after Bauza-Ribot et al. (2012) and Baird et al. (2011), respectively.
Figure 1 from: Angyal D, Chávez Solís E, Magana B, Balázs G, Simoes N (2018) Mayaweckelia troglomorpha (Amphipoda, Hadziidae), a new subterranean amphipod species from Yucatán state (Yucatán Peninsula, Mexico). ZooKeys 735: 1-25. https://doi.org/10.3897/zookeys.735.21164
Figure 1 Location of the studied area, showing the four cenotes where the new species was collected (Yucatán federal state, México).
Figure 3 from: Lunghi E, Bruni G, Ficetola F, Manenti R (2018) Is the Italian stream frog (Rana italica Dubois, 1987) an opportunistic exploiter of caves twilight zone? Subterranean Biology 25: 49-60. https://doi.org/10.3897/subtbiol.25.23803
Figure 3 Boxplots indicating differences in the use of cave spaces. Difference between A age classes (Adults/ Juveniles) and B adult sexes (Females/Males) in the use of the subterranean surface area; differences between C age classes and D adult sexes in the use of cave walls. Diagonal bar inside the box represents the median.
Figure 1 from: Lunghi E, Bruni G, Ficetola F, Manenti R (2018) Is the Italian stream frog (Rana italica Dubois, 1987) an opportunistic exploiter of caves twilight zone? Subterranean Biology 25: 49-60. https://doi.org/10.3897/subtbiol.25.23803
Figure 1 Two juveniles of Rana italica: a) during the measurement of SVL and b) climbing cave walls.
Figure 3 from: Minelli A, Oggioni A, Pugnetti A, Sarretta A, Bastianini M, Bergami C, Bernardi Aubry F, Camatti E, Scovacricchi T, Socal G (2018) The project EcoNAOS: vision and practice towards an open approach in the Northern Adriatic Sea ecological observatory. Research Ideas and Outcomes 4: e24224. https://doi.org/10.3897/rio.4.e24224
Figure 3 The spiral model - an open research lifecycle involves sharing of each step of the process, including not only scientific papers but also research ideas, data (raw and processed), metadata, methods, software (Minelli et al. 2017).
Figure 4a from: Minelli A, Oggioni A, Pugnetti A, Sarretta A, Bastianini M, Bergami C, Bernardi Aubry F, Camatti E, Scovacricchi T, Socal G (2018) The project EcoNAOS: vision and practice towards an open approach in the Northern Adriatic Sea ecological observatory. Research Ideas and Outcomes 4: e24224. https://doi.org/10.3897/rio.4.e24224
Figure 4a An extract from data collected since 1965 to today in the NAS. - snapshot of the organization of the main table of data
Figure 1 from: Minelli A, Oggioni A, Pugnetti A, Sarretta A, Bastianini M, Bergami C, Bernardi Aubry F, Camatti E, Scovacricchi T, Socal G (2018) The project EcoNAOS: vision and practice towards an open approach in the Northern Adriatic Sea ecological observatory. Research Ideas and Outcomes 4: e24224. https://doi.org/10.3897/rio.4.e24224
Figure 1 The LTER-Italy parent site "Northern Adriatic Sea". The four research sites that compose it, together with the fixed point observatories, are evidenced. 1: Gulf of Trieste and Mambo buoy, 2: Gulf of Venice and Acqua Alta Tower, 3: Po Delta and Romagna Coast and S1-GB and E1 buoys, 4: Senigallia-Susak Transect and TeleSenigallia Pylon (Minelli et al. 2018)
Figure 4c from: Minelli A, Oggioni A, Pugnetti A, Sarretta A, Bastianini M, Bergami C, Bernardi Aubry F, Camatti E, Scovacricchi T, Socal G (2018) The project EcoNAOS: vision and practice towards an open approach in the Northern Adriatic Sea ecological observatory. Research Ideas and Outcomes 4: e24224. https://doi.org/10.3897/rio.4.e24224
Figure 4c An extract from data collected since 1965 to today in the NAS. - 3D visualization of data from the viewpoint in b: the yellow grid represents the sea level, each set of vertical points represents more samplings relying on the same (X, Y) coordinates but at different depths (Z)
Figure 4b from: Minelli A, Oggioni A, Pugnetti A, Sarretta A, Bastianini M, Bergami C, Bernardi Aubry F, Camatti E, Scovacricchi T, Socal G (2018) The project EcoNAOS: vision and practice towards an open approach in the Northern Adriatic Sea ecological observatory. Research Ideas and Outcomes 4: e24224. https://doi.org/10.3897/rio.4.e24224
Figure 4b An extract from data collected since 1965 to today in the NAS. - 2D visualization of custom sampling stations (used from 1965 to 1990, before GPS advent) and real sampling points (until 2015)
Figure 2 from: Guevara-Guerrero G, Bonito G, Smith ME, Healy R, Grupe II AC, Cázares E, Castellano MA, Trappe JM (2018) Tuber aztecorum sp. nov., a truffle species from Mexico belonging to the Maculatum clade (Tuberaceae, Pezizales). MycoKeys 30: 61-72. https://doi.org/10.3897/mycokeys.30.22887
Figure 2 a–i Tuber aztecorum (holotype ITCV 993). a; Two ascomata showing the peridial surface (bar = 1 cm) b Ascoma in cross-section showing peridial surface and glebal surface (bar = 1 cm) c Peridial surface magnified showing the verrucose surface (bar = 1 mm) d Clusters of erect hyphae emanating from the peridial surface (bar =10 µm) e A single surface hair-like hypha (bar = 10 µm) f Cystidium (bar = 10 µm) g Cross section of peridium showing pseudoparenchyma-like epicutis (bar = 20 µm) h Ascospores within asci in surface view showing the alveoli (bar = 20 µm) i Ascospore within asci in surface view showing the alveoli magnified (bar = 20 µm).
Figure 1 from: Guevara-Guerrero G, Bonito G, Smith ME, Healy R, Grupe II AC, Cázares E, Castellano MA, Trappe JM (2018) Tuber aztecorum sp. nov., a truffle species from Mexico belonging to the Maculatum clade (Tuberaceae, Pezizales). MycoKeys 30: 61-72. https://doi.org/10.3897/mycokeys.30.22887
Figure 1 Phylogenetic tree inferred under the maximum-likelihood (ML) criterion from the ITS rDNA alignment corresponding to the Tuber dataset. The tree was rooted using midpoint rooting. Numbers on the branches represent support values from 1,000 ML bootstrap replicates. The branches are scaled in terms of the expected number of substitutions per site. The phylogeny is rooted with species belonging to the Latisporum clade. Accession numbers in the sequence labels indicate sequences from Genbank.
Supplementary material 1 from: Bouvet D, Pistarino A, Soldano A, Banfi E, Barbo M, Bartolucci F, Bovio M, Cancellieri L, Conti F, Di Pietro R, Faraoni F, Fascetti S, Galasso G, Gangale C, Lattanzi E, Peccenini S, Perrino EV, Rizzieri Masin R, Romano VA, Rosati L, Salerno G, Stinca A, Tilia A, Uzunov D (2018) Contribution to the floristic knowledge of the head of the Po Valley (Piedmont, north Italy). Italian Botanist 5: 57-69. https://doi.org/10.3897/italianbotanist.5.24546
Supplementary data : Explanation note:
Figure 1 from: Bouvet D, Pistarino A, Soldano A, Banfi E, Barbo M, Bartolucci F, Bovio M, Cancellieri L, Conti F, Di Pietro R, Faraoni F, Fascetti S, Galasso G, Gangale C, Lattanzi E, Peccenini S, Perrino EV, Rizzieri Masin R, Romano VA, Rosati L, Salerno G, Stinca A, Tilia A, Uzunov D (2018) Contribution to the floristic knowledge of the head of the Po Valley (Piedmont, north Italy). Italian Botanist 5: 57-69. https://doi.org/10.3897/italianbotanist.5.24546
Figure 1 Area where the annual field trip of the working group for Floristics, Systematics and Evolution of the Italian Botanical Society took place and topographic maps (scale 1:20,000) with collecting sites (number and yellow dots). For detailed data of each site, see Suppl. material 1: 5. a July, 9 (site n. 2), July, 11 (from site n. 8 to n. 16), July, 12 (from site n. 17 to n. 20) b July, 9 (site n. 1) and July, 10 (from site n. 3 to n. 7). From: GeoPortale Piemonte (Regione Piemonte – http://www.geoportale.piemonte.it/).
Supplementary material 7 from: Lommen STE, Jongejans E, Leitsch-Vitalos M, Tokarska-Guzik B, Zalai M, Müller-Schärer H, Karrer G (2018) Time to cut: population models reveal how to mow invasive common ragweed cost-effectively. NeoBiota 39: 53-78. https://doi.org/10.3897/neobiota.39.23398
Deterministic population models per reference data set (graphic results, population dynamics) :
Supplementary material 3 from: Lommen STE, Jongejans E, Leitsch-Vitalos M, Tokarska-Guzik B, Zalai M, Müller-Schärer H, Karrer G (2018) Time to cut: population models reveal how to mow invasive common ragweed cost-effectively. NeoBiota 39: 53-78. https://doi.org/10.3897/neobiota.39.23398
Burial experiments (location table, methods, graphic results) :
Supplementary material 5 from: Lommen STE, Jongejans E, Leitsch-Vitalos M, Tokarska-Guzik B, Zalai M, Müller-Schärer H, Karrer G (2018) Time to cut: population models reveal how to mow invasive common ragweed cost-effectively. NeoBiota 39: 53-78. https://doi.org/10.3897/neobiota.39.23398
Parametrisation of population models of experimental mowing treatments (model parameterisation) :
Supplementary material 4 from: Lommen STE, Jongejans E, Leitsch-Vitalos M, Tokarska-Guzik B, Zalai M, Müller-Schärer H, Karrer G (2018) Time to cut: population models reveal how to mow invasive common ragweed cost-effectively. NeoBiota 39: 53-78. https://doi.org/10.3897/neobiota.39.23398
Parametrisation of population models of unmanaged references (model parameterisation) :
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.