Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

25,372

datasets available to search

ShareScore release 0.7.1

Reset

Dataset results

25,372 results for “Transcriptomics”

Learn how ShareScore rates datasets ↗
geo24/100

Human liver Huh cell transcriptome (mRNA) response to a Wild-type ΔVP30 Ebola virus, Δmucin, and ssGP mutants

GEO Series GSE80058. Homo sapiens. 119 samples. Type: Expression profiling by array.

openGEO-OpenMay 2016View details →
geo24/100

Spatiotemporally Deciphering the Unknown Role of Persistent HPV Infection in Precancer to Cervical Cancer Progression: Integrating Single-Cell RNA-Sequencing Landscape and Spatial Transcriptomics Atla

GEO Series GSE208654. Homo sapiens. 4 samples. Type: Other.

openGEO-OpenApr 2023View details →
geo24/100

Transcriptomic Validation of ALS-Derived Motor Neurons Following m6A Hypomethylation Restoration

GEO Series GSE290244. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2025View details →
geo24/100

Systems-level computational translation of mouse and human transcriptomics reveals a role for the unfolded protein response in Mycobacterium tuberculosis infection

GEO Series GSE281697. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2024View details →
geo24/100

Transcriptomic effects of culturing leukaemia cells in osteoclast-derived conditioned media

GEO Series GSE220262. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2025View details →
geo24/100

Single cell transcriptomic analyses of the dynamic local and systemic response to cardiac injury in mice and zebrafish [zebrafish]

GEO Series GSE227190. Danio rerio. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2024View details →
geo24/100

Transcriptomic analysis unveils bona fide molecular signatures of microglia under conditions of homeostasis and viral encephalitis

GEO Series GSE271293. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenAug 2024View details →
geo24/100

Transcriptomic responses to Ivacaftor and prediction of Ivacaftor clinical responsiveness

GEO Series GSE128723. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2019View details →
geo24/100

High-resolution transcriptome analysis with long-read RNA sequencing

GEO Series GSE57862. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2014View details →
geo24/100

Characterisation of the whole blood mRNA transcriptome in Holstein-Friesian and Jersey calves in response to gradual weaning

GEO Series GSE76841. Bos taurus. 48 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2016View details →
geo24/100

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Ccn2a-/- cardiac ventricular Transcriptomes

GEO Series GSE164491. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2021View details →
geo24/100

Transcriptomics in olfactory cells transfected with SARS-CoV-2 structural proteins

GEO Series GSE182849. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo24/100

Global transcriptome analyses and intracellular regulatory mechanisms of glycine betaine and mycosporine-2-glycine expression in the halotolerant cyanobacterium Halothece sp. PCC 7418 exposed to abiot

GEO Series GSE206286. Halothece sp. PCC 7418. 7 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo24/100

Global transcriptome analysis of paracancerous lung tissues from the B16 metastasis mice model under the influence of lactoferrin knockout

GEO Series GSE120179. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2019View details →
geo24/100

Transcriptome analysis of a red-flowered white clover mutant

GEO Series GSE101059. Trifolium repens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2018View details →
geo24/100

An ancient symbiotic fungal gene network revealed by comparative transcriptomics [Grosea_symbiotic_tissues]

GEO Series GSE67911. Brachypodium distachyon; Gigaspora rosea; Medicago truncatula. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2016View details →
geo24/100

Differential expression and correlation analysis of global transcriptome for hemorrhagic transformation after acute ischemic stroke

GEO Series GSE199435. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2022View details →
geo24/100

Transcriptome comparison between Bacillus cereus ATCC 10987 cells with and without iron starvation

GEO Series GSE74045. Bacillus cereus ATCC 10987. 24 samples. Type: Expression profiling by array.

openGEO-OpenMay 2016View details →
geo24/100

Spatiotemporal heterogeneity of inflammatory changes in Alzheimer's disease analyzed spatially resolved transcriptome

GEO Series GSE174321. Mus musculus. 4 samples. Type: Other.

openGEO-OpenJan 2024View details →
geo24/100

Transcriptomic analysis of Erwinia amylovora bacteriophage insensitive mutants

GEO Series GSE291879. Erwinia amylovora. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record