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FIGURE 2. The single most parsimonious trees obtained from a in A new species of Scleroramularia associated with sooty blotch and flyspeck in Southern China
FIGURE 2. The single most parsimonious trees obtained from a heuristic search combined ITS and TEF sequence alignment. Numbers at branching nodes represent bootstrap values>50 % (1000 replicates). The tree was rooted to Beauveria bassiana (GenBank AY532027 and AY531936 for ITS and TEF, respectively).
FIGURE 2 in A new species of Metaphrixus Nierstrasz & Brender à Brandis, 1931 (Isopoda: Bopyridae: Hemiarthrinae) associated with an Hippolytidae shrimp from Costa Rica
FIGURE 2. Distribution of the five species of Metaphrixus Nierstrasz & Brender à Brandis, 1931. References for all records can be found in Table 1.
FIGURE 1 in A new species of Metaphrixus Nierstrasz & Brender à Brandis, 1931 (Isopoda: Bopyridae: Hemiarthrinae) associated with an Hippolytidae shrimp from Costa Rica
FIGURE 1. Metaphrixus wehrtmanni sp. nov., female holotype (MZ-UCR 3824). A, habitus, dorsal view; B, habitus, ventral view; C, right antennula and antenna; D, barbula; E, right maxilliped, inner view; F, right maxilliped, outer view; G, right oostegite 1, outer view; H, left oostegite 1, outer view; I, pereopod 1, convex side; J, pleopods. Scale bars: A and J = 0.5 mm; B = 0.75 mm; C = 0.05 mm; D = 0.25 mm; E and F = 0.2 mm; G, H and I = 0.1 mm.
FIGURE 8 in Cytospora species associated with canker disease of three anti-desertification plants in northwestern China
FIGURE 8. Pattern of overlapping Cytospora species among Elaeagnus angustifolia, Hippophae rhamnoides and Salix psammophila.
FIGURE 2 in Cytospora species associated with canker disease of three anti-desertification plants in northwestern China
FIGURE 2. Phylogram of ITS regions based on MP, ML and Bayesian analysis. Values above the branches indicate maximum parsimony bootstrap (MP BP ≥ 50 %) and maximum likelihood bootstrap (ML BP ≥ 50 %). Values below branches represent posterior probabilities (BI PP ≥ 0.90) from Bayesian inference. Scale bar = 20 nucleotide substitutions. The new sequences resulting from the current study are in blue. Ex-type strains are in bold. The strains designated as epitype are shown in asterisk.
FIGURE 5 in Cytospora species associated with canker disease of three anti-desertification plants in northwestern China
FIGURE 5. Morphology of Cytospora elaeagni from Elaeagnus angustifolia (BJFC-S642). a, d: Habit of conidiomata on a twig. b, c: Longitudinal sections through conidiomata. e, f: Transverse sections through conidiomata. g: Conidiophores. h: Conidia. i: Colonies on PDA at 3 days (left) and 30 days (right). Scale bars: a=1 mm; b–f=0.5 mm; g=20 μm; h=5 μm.
FIGURE 7 in Cytospora species associated with canker disease of three anti-desertification plants in northwestern China
FIGURE 7. Morphology of Cytospora nivea from Salix psammophila (BJFU-S979). a, d: Habit of conidiomata on twig. b, c: Longitudinal sections through conidiomata. e, f: Transverse sections through conidiomata. g: Conidiophores. h: Conidia. i: Colonies on PDA at 3 days (left) and 30 days (right). j: Habit of ascomata on twig. k: Longitudinal sections through ascomata. l: Disc of ascomata on twig. m: Transverse sections through ascomata. n: Asci. o: ascospores. p: Colonies on PDA at 3 days (left) and 30 days (right). Scale bars: a, j=1
FIGURE 1 in Cytospora species associated with canker disease of three anti-desertification plants in northwestern China
FIGURE 1. Phylogram of combined genes of ITS, nrLSU, RPB2, and ACT genes based on MP, ML and Bayesian analysis. Values above the branches indicate maximum parsimony bootstrap (MP BP ≥ 50 %) and maximum likelihood bootstrap (ML BP ≥ 50 %). Thickened branches represent posterior probabilities (BI PP ≥ 0.90) from Bayesian inference. Scale bar = 50 nucleotide substitutions. Ex-type strains are in bold. The strains designated as epitype are shown in asterisk.
FIGURE 6 in Cytospora species associated with canker disease of three anti-desertification plants in northwestern China
FIGURE 6. Morphology of Cytospora hippophaes from Hippophae rhamnoides (BJFC-S779). a, d: Habit of conidiomata on twig. b, c: Longitudinal sections through conidiomata. e, f: Transverse sections through conidiomata. g: Conidiophores. h: Conidia. i: Colonies on PDA at 3 days (left) and 30 days (right). j: Habit of ascomata on twig. k: Longitudinal sections through ascomata. l: Disc of ascomata on twig. m: Transverse sections through ascomata. n: Asci. o: ascospores. p: Colonies on PDA at 3 days (left) and 30 days (right). Scale bars: a, j=1 mm; b–f, k–m=0.5 mm; g=20 μm; h=5 μm; n–o=10 μm.
FIGURE 4 in Cytospora species associated with canker disease of three anti-desertification plants in northwestern China
FIGURE 4. Morphology of Cytospora populina from Salix psammophila (BJFC-S978). a, d: Habit of ascomata on a twig. b, c: Longitudinal sections through ascomata. e, f: Transverse sections through ascomata. g: Ascus. h: ascospores. i: Colonies on PDA at 3 days (left) and 30 days (right). Scale bars: a=1 mm; b–f=0.5 mm; g–h=20 μm.
FIGURE 3 in Cytospora species associated with canker disease of three anti-desertification plants in northwestern China
FIGURE 3. Morphology of Cytospora gigaspora from Salix psammophila (BJFC-S975, holotype). a, d: Habit of conidiomata on a twig. b, c: Longitudinal sections through conidiomata. e, f: Transverse sections through conidiomata. g: Conidiophores. h: Conidia. i: Colonies on PDA at 3 days (left) and 30 days (right). Scale bars: a = 1 mm; b–f = 0.5 mm; g = 20 μm; h = 5 μm.
FIGURE 2 in Pochonia cordycepisociata, a new species associated with Chinese cordyceps in Tibet, China
FIGURE 2. Phylogenetic tree derived from maximum parsimony analysis based on the dataset of combined sequences of SSU+LSU+ ITS+RPB1+RPB2+TEF, depicting the relationships of the new species Pochonia cordycepisociata with closely related taxa. Bootstrap percentages over 50% and significant Bayesian posterior probability (≥ 95%) are shown on the respective branches. Hypocrella raciborskii BCC 7869 and Hypocrella discoidea BCC 8237 were used as outgroup.
FIGURE 1 in Pochonia cordycepisociata, a new species associated with Chinese cordyceps in Tibet, China
FIGURE 1. Pochonia cordycepisociata (CGMCC 3.17366). a. Colonies on PDA after 15 days of incubation at 20 °C; b. reverse side of the colony; c–d. conidiophores; e. conidia; f–h. aggregated compact hyphae structures. Scale bars = 10 μm.
FIGURE 3 in Suillus adhikarii, a new species from the subalpine Himalaya of India and Nepal associated with Larix
FIGURE 3. Suillus adhikarii (VC 1449) 30-day-old culture on Hagem's agar in a 9-cm-diam Petri plate. Dark reddish guttate droplet formed on colony.
FIGURE 2 in Suillus adhikarii, a new species from the subalpine Himalaya of India and Nepal associated with Larix
FIGURE 2. Suillus adhikarii (KD 11-007) a. Basidiospores b–c. Caulocystidia d. Caulobasidia e. Tube basidia f. Radial section through pileipellis g. Pleuro- and cheilocystidia. Bars: a–g = 10 μm.
FIGURE 1 in Suillus adhikarii, a new species from the subalpine Himalaya of India and Nepal associated with Larix
FIGURE 1. Suillus adhikarii (KD 11-007): a & c. Fresh basidiomata in field b. Concolorous background color and reticulation of stipe above annulus d. Pore surface e. Compound pores (from dry material) f. Radial section through pileipellis g. Hymenial cystidia h. Basidiospores. Bars: e = 1000 μm, f = 50 μm, g–h = 10 μm.
FIGURE 2. Andinia wayqechensis. A. Habit, ascendent plant growing associated with mosses. B. Habit, lateral view with a flower and fruit. C. Flower, lateral view. D. Flower, frontal view. Photographs A and C in Andinia wayqechensis (Orchidaceae), a new species from southern Peru
FIGURE 2. Andinia wayqechensis. A. Habit, ascendent plant growing associated with mosses. B. Habit, lateral view with a flower and fruit. C. Flower, lateral view. D. Flower, frontal view. Photographs A and C by Anne-Laure Maire, B and D by Carlos Martel.
FIGURE 2 in Ophiostoma olgensis, a new species associated with Larix spp. and Ips subelongatus in northern China
FIGURE 2. Light micrographs of Ophiostoma olgensis. Colony morphology (A: O. olgensis on MEA; B: O. olgensis on PDA); Sexual characteristic (C: Perithecium, D: Perithecium neck with ostiolar hyphae, E: Fertile perithecium releasing ascospores; F, G: Reniform ascospores without sheaths); Asexual characteristic (H: Hyalorhinocladiella anamorph with annellidic conidium development, I: Obovoid with sharp bases to almost clavate conidia). Scale bar: C=100 μm; D-I=10 μm.
FIGURE 1 in Ophiostoma olgensis, a new species associated with Larix spp. and Ips subelongatus in northern China
FIGURE 1. Phylogram obtained from MP analysis of ITS1-5.8S-ITS2 rDNA (partial β-tubulin, EF-1α, and actin gene regions) sequences, showing fungal associates of Ips subelongatus from north China within the Ophiostomatales. Novel sequences obtained in this study are printed in bold type. MP bootstrap values (10,000 replicates) (bold type) and ML bootstrap support values (1,000 replicates) (normal type)>70% are indicated at the nodes. Values <80% are indicated by the symbol *. Two or three probabilities (above 90%) are indicated by bold lines at the relevant branching points. Scale bar = total nucleotide differences between taxa; ML, maximum likelihood; MP, maximum parsimony; BI, Bayesian inference.
FIGURE 4 in Ophiostoma pehueninum, a new species associated with Araucaria araucana in Chile
FIGURE 4. Colony morphology of Ophiostoma pehueninum (holotype) after 21 d growth at 25 °C on MEA, PDA and OA (from left to right).
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.