Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
894
datasets available to search
ShareScore release 0.9.0
Dataset results
894 results for “Single-cell RNA-seq”
Single-cell RNA-seq of UTCαβ population in sarcoma mice models
GEO Series GSE123508. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq reveals the transcriptional landscape and heterogeneity of aortic macrophages in murine atherosclerosis
GEO Series GSE97310. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Cysteine deficiency triggers adipose tissue thermogenesis and weight-loss [single-cell RNA-seq]
GEO Series GSE293660. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
C1 single-cell RNA-seq of immature (P6) ID4-EGFP mouse spermatoognia
GEO Series GSE108970. Mus musculus. 278 samples. Type: Expression profiling by high throughput sequencing.
Dynamic changes of immune cells in systemic lupus erythematosus with nephritis using longitudinal peripheral blood single-cell RNA-seq
GEO Series GSE254176. Homo sapiens. 57 samples. Type: Expression profiling by high throughput sequencing; Other.
A single-cell atlas of the microenvironment of implanted biomaterials and computational analysis of the transcriptional signalling networks [bulk RNA-seq]
GEO Series GSE175888. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Deep learning enables accurate clustering with batch effect removal in single-cell RNA-seq analysis
GEO Series GSE146974. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell profiling reveals Colonic CD8 Topography in IBD -hIL26 Mouse RNA-Seq
GEO Series GSE148505. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq from primary somatosensory cortical S1L2/3glutamatergic neurons of the mouse
GEO Series GSE128916. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
High-Throughput Single-Cell Labeling (Hi-SCL) for RNA-Seq using drop-based microfluidics
GEO Series GSE62050. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Brain motor and fear circuits differentially regulate leukocyte distribution and function during acute stress [single-cell RNA-seq]
GEO Series GSE201391. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Predicting the functional states of human iPSC-derived neurons with single-cell RNA-seq and electrophysiology
GEO Series GSE159074. Homo sapiens. 56 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq reveals differentiation hierarchy of normal human bone marrow and a distinct transcriptome signature of aneuploid cells
GEO Series GSE99095. Homo sapiens. 1202 samples. Type: Expression profiling by high throughput sequencing.
Detecting Activated Cell Populations Using Single-Cell RNA-Seq
GEO Series GSE103976. Mus musculus. 19 samples. Type: Expression profiling by high throughput sequencing.
14-3-3 epsilon is an intracellular component of TNFR2 receptor complex and its activation protects against osteoarthritis [single-cell RNA-seq]
GEO Series GSE169454. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
Bulk and single-cell RNA-seq of mouse blastocyst, blastoid Trophoblast stem cells and Embryonic stem cells
GEO Series GSE99786. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of colonic tumors from epithelial HO-1 knockout and control mice in a colitis-associated cancer model
GEO Series GSE312733. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
TREM2 regulates microglial cholesterol metabolism upon chronic phagocytic challenge [single-cell RNA-Seq]
GEO Series GSE130626. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation [bulk RNA-Seq]
GEO Series GSE96811. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive transcriptomic profiles of non-small cell lung cancer by single-cell RNA-seq
GEO Series GSE119911. Homo sapiens. 106 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.