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391
datasets available to search
ShareScore release 0.9.0
Dataset results
391 results for “Spatial analysis”
Gingival spatial analysis reveals geographic immunological variation in a microbiota-dependent and -independent manner [Spatial Transcriptomics]
GEO Series GSE269576. Mus musculus. 4 samples. Type: Other.
Transcriptome In Vivo Analysis (TIVA) of spatially defined single cells in intact live mouse and human brain tissue
GEO Series GSE52525. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing.
Analysis of spatial mRNA expression differences in the skin of Casp-8F/–K5-Cre or Casp-8F/+K5-Cre mice
GEO Series GSE17344. Mus musculus. 2 samples. Type: Expression profiling by array.
Single-cell and spatial transcriptome analysis revealed the immunomodulatory role of T cells in the colon cancer tumor microenvironment
GEO Series GSE289314. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic analysis of Gastric adenocarcinoma
GEO Series GSE245704. Homo sapiens. 1 samples. Type: Other.
High resolution spatially resolved transcriptomic analysis of mouse pancreatic sections during embryonic development
GEO Series GSE290835. Mus musculus; synthetic construct. 55 samples. Type: Other.
Spatial transcriptome analysis for placental tissue of preeclampsia
GEO Series GSE266604. Homo sapiens. 2 samples. Type: Other.
Light-Assisted Single-Stranded DNA Open-Chromatin Analysis in Single Spatially Localized Neuronal Cells Identifies the Capacity of Endogenous DNA to Act Catalytically [CHEX-seq]
GEO Series GSE231719. Homo sapiens; Mus musculus. 417 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Molecular and spatial analysis unveils the functional basis of tertiary lymphoid structures in Sjogren’s syndrome[scRNA-seq]
GEO Series GSE272409. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
Spatial analysis of microRNA regulation at defined tumor hypoxia levels reveals biological traits of aggressive prostate cancer [cell lines]
GEO Series GSE256391. Homo sapiens. 47 samples. Type: Non-coding RNA profiling by high throughput sequencing.
STAMP: Single-Cell Transcriptomics Analysis and Multimodal Profiling through Imaging [CosMx Spatial]
GEO Series GSE290466. Homo sapiens. 92 samples. Type: Other.
Spatial analysis of young and old murine lungs exposed to ozone and fibrogenic stress [spatial_ozone]
GEO Series GSE273048. Mus musculus. 50 samples. Type: Expression profiling by high throughput sequencing.
Integrative Analysis of Spatial Transcriptome with Single-cell Transcriptome and Single-cell Epigenome in Mouse Lungs after Immunization
GEO Series GSE190225. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer
GEO Series GSE225857. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys
GEO Series GSE233513. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial Transcriptomic Analysis Of Primary And Metastatic Pancreatic Cancers Highlights Tumor Microenvironmental Heterogeneity
GEO Series GSE272362. Homo sapiens. 30 samples. Type: Other.
Spatial transcriptomic analysis of a pre-clinical NF1 pseudarthrosis fracture model
GEO Series GSE218046. Mus musculus. 2 samples. Type: Other.
Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [RNA-Seq]
GEO Series GSE309820. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [CRISPR screen]
GEO Series GSE144238. Homo sapiens. 48 samples. Type: Other.
Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [fetal tissues]
GEO Series GSE95630. Homo sapiens. 445 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.