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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics [stereo-seq]
GEO Series GSE264321. Mus musculus. 5 samples. Type: Other.
Dose-dependent disruption of hepatic zonation by 2,3,7,8-tetrachlorodibenzo-p-dioxin in mice: integration of single-nuclei RNA sequencing and spatial transcriptomics
GEO Series GSE206294. Mus musculus. 17 samples. Type: Other.
High resolution spatially resolved transcriptomic analysis of mouse pancreatic sections during embryonic development
GEO Series GSE290835. Mus musculus; synthetic construct. 55 samples. Type: Other.
Spatial transcriptome analysis for placental tissue of preeclampsia
GEO Series GSE266604. Homo sapiens. 2 samples. Type: Other.
Deciphering the molecular mechanism of flight loss in mulberry silkworm through the integration of single-cell and spatial transcriptomics [H_scRNA-seq]
GEO Series GSE253667. Helicoverpa armigera. 2 samples. Type: Expression profiling by high throughput sequencing.
A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice
GEO Series GSE298650. Mus musculus. 5 samples. Type: Other.
Spatial transcriptomics of colorectal cancer tissues
GEO Series GSE267401. Homo sapiens. 4 samples. Type: Expression profiling by genome tiling array.
Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC [ST]
GEO Series GSE278687. Homo sapiens. 21 samples. Type: Other.
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics - scRNAseq v2 with cell multiplexing
GEO Series GSE260799. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
SARS-CoV-2 Niches in Human Placenta Revealed by Spatial Transcriptomics
GEO Series GSE222987. Homo sapiens; Severe acute respiratory syndrome coronavirus 2. 16 samples. Type: Expression profiling by high throughput sequencing; Other.
Single cell and spatial transcriptomic profile of whole CLAD and donor control lung tissue
GEO Series GSE224210. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
Unraveling the Cellular Landscape of Abdominal Aortic Aneurysm Using High-Resolution Spatial Transcriptomics:
GEO Series GSE229500. Mus musculus; synthetic construct. 3 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic and proteomic spatial profiling of tertiary lymphoid aggregates in head and neck cancer reveal spatial tissue dynamics and profiles associated with immunotherapy response [protein]
GEO Series GSE259280. Homo sapiens. 375 samples. Type: Other.
The spatial transcriptomic landscape of fibrosing ILDs
GEO Series GSE255175. Homo sapiens. 186 samples. Type: Expression profiling by high throughput sequencing.
Kidney single-cell transcriptomes predict spatial corticomedullary gene expression and tissue osmolality gradients
GEO Series GSE145690. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]
GEO Series GSE283832. Homo sapiens. 7 samples. Type: Other.
Comparison of the Illumina NextSeq 2000 and GeneMind Genolab M sequencing platforms for spatial transcriptomics
GEO Series GSE227019. Homo sapiens. 6 samples. Type: Other.
Combined aerobic and resistance exercise training alters the spatial transcriptome of skeletal muscle in young adults
GEO Series GSE270703. Homo sapiens. 10 samples. Type: Other.
STAMP: Single-Cell Transcriptomics Analysis and Multimodal Profiling through Imaging [CosMx Spatial]
GEO Series GSE290466. Homo sapiens. 92 samples. Type: Other.
Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [Spatial Transcriptome seq]
GEO Series GSE252176. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.