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219
datasets available to search
ShareScore release 0.7.1
Dataset results
219 results for “genotyping‐by‐sequencing”
Phenotypic and Genotypic Characterization of Subjects With Syndromic Obesity: Identifying New Candidate Genes by Exome Sequencing (OBEXOME)
ClinicalTrials.gov study NCT02510989. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Whole Exome and Whole Genome Sequencing for Genotyping of Inherited and Congenital Eye Conditions
ClinicalTrials.gov study NCT02077894. IPD Sharing: NO. Countries: 1. Publications: 0.
Single-cell sequencing reveals the relationship between phenotypes and genotypes of Klinefelter syndrome
GEO Series GSE136353. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Data from: Expected genotype quality and diploidized marker data from genotyping-by-sequencing of Urochloa spp. tetraploids
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Data from: Cost effective microsatellite isolation and genotyping by high throughput sequencing
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Data from: Differentiating diploid and triploid individuals using single nucleotide polymorphisms genotyped by amplicon-sequencing
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Data from: Rapid and inexpensive whole-genome genotyping-by-sequencing for crossover localization and fine-scale genetic mapping.
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Single-cell genome-wide concurrent haplotyping and copy-number profiling through genotyping-by-sequencing in bovine embryos
GEO Series GSE178156. Bos taurus. 9 samples. Type: Genome variation profiling by array.
Whole genome sequencing of Saccharomyces cerevisiae: from genotype to phenotype for improved metabolic engineering applications
GEO Series GSE21479. Saccharomyces cerevisiae; Schizosaccharomyces pombe. 8 samples. Type: Expression profiling by array.
Database: results of the genotyping of the population of recombinant lines TU/MUSICA (TUM) by means of Genotyping by Sequencing
<p>The database contains the files:</p> <p>- imagen with a seed per recombinant line as well as seed of the two parents</p> <p><strong><em> Figure1_TUM RIL population.jpg</em></strong></p> <p>- imagen of image of the resulting genetic map</p> <p><strong><em> Figure 3.pdf</em></strong></p> <p>- file with the GBS results (95678 SNPs)</p> <p><em><strong>all.filter_ordered.vcf</strong></em></p> <p>- file with the SNPs included in the genetic map published (842 loci/ 175 lines)</p> <p><strong><em>GENETIC MAP_TUM.xlsx</em></strong></p> <p>Genotyping was performed according to Garcia Fernández et al (2021)</p> <p><strong>Reference</strong>: García-Fernández, C., Campa, A. & Ferreira, J.J. Dissecting the genetic control of seed coat color in a RIL population of common bean (<em>Phaseolus vulgaris</em> L.). <em>Theor Appl Genet</em> <strong>134, </strong>3687–3698 (2021). https://doi.org/10.1007/s00122-021-03922-y</p>
Small RNA sequencing of brain-derived extracellular vesicles from post-mortem brain tissue of controls and Alzheimer's disease patients with different APOE genotypes
GEO Series GSE159541. Homo sapiens. 90 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing of leaf tissues from two contrasting chickpea genotypes reveals mechanisms for drought tolerance
GEO Series GSE104609. Cicer arietinum. 12 samples. Type: Expression profiling by high throughput sequencing.
Next generation sequencing transcriptomic analysis of bone marrow derived macrophages within control, Cbl-/-, Cbl-b -/- and DKO genotypes
GEO Series GSE130527. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Small RNA sequencing of Rice Efficient and Non-Efficient Genotypes to determine uptake of Nitrogen
GEO Series GSE198560. Oryza sativa Indica Group. 8 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Reduced representation bisulphite sequencing of two chickpea genotypes to identify differential DNA methylation patterns associated with drought tolerance and sensitivity
GEO Series GSE129110. Cicer arietinum. 12 samples. Type: Methylation profiling by high throughput sequencing.
Genetic Structure of Duplicated Sequences Revealed by Genotyping Single Sperm
GEO Series GSE11957. Homo sapiens. 249 samples. Type: Genome variation profiling by SNP array; SNP genotyping by SNP array.
High concordance between SNPs identified by the porcine 60K BeadChip genotyping array (Illumina) and the whole-genome sequencing
GEO Series GSE123327. Sus scrofa. 10 samples. Type: SNP genotyping by SNP array; Genome variation profiling by SNP array.
Single cell RNA sequencing reveals limited effects of Lrrk2 genotype in a mouse model of acute CNS inflammation
GEO Series GSE265833. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
RNA-Sequencing of PEG-stressed Sesame roots in drought sensitive and tolerant genotypes
GEO Series GSE148340. Sesamum indicum. 12 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.