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Fig. 1. Overall habitus. A in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 1. Overall habitus. A, Chiromantes haematocheir, lectotype male (33.7 × 29.7 mm) (RMNH-D160), Japan; B, C. ryukyuanus, holotype male (33.1 × 29.6 mm) (RUMF-ZC-539), Okinawa Island, Japan; C, Orisarma dehaani, lectotype male (39.5 × 35.7 mm) (RMNH-D157), Japan; D, O. dehaani, male (36.4 × 34.4 mm) (ZRC 2011.1027), Kumejima Island, Japan; E, O. neglectum, neotype male (35.6 × 31.8 mm) (ZRC 1998.310), Shanghai, China; F, O. magnum, paratype male (50.6 × 45.6 mm) (ZRC 2013.0173), Ogasawara Island, Japan; G, O. patshuni, male (14.2 × 13.0 mm) (ZRC 1998.345), Hong Kong; H, O. patshuni, male (20.4 × 18.2 mm) (ZRC 2012.0032), Hong Kong.
Fig. 5. Chela. A, B in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 5. Chela. A, B, Chiromantes haematocheir, lectotype male (33.7 × 29.7 mm) (RMNH-D160), Japan; C, C. haematocheir, male (18.6 × 20.7 mm) (RUMF-ZC-544), Japan; D–F, Orisarma dehaani, lectotype male (39.5 × 35.7 mm) (RMNH-D157), Japan; G, O. neglectum, neotype male (35.6 × 31.8 mm) (ZRC 1998.310), Shanghai, China; H, O. patshuni, male (14.2 × 13.0 mm) (ZRC 1998.345), Hong Kong; I, O. patshuni, male (20.4 × 18.2 mm) (ZRC 2012.0032), Hong Kong. A, D, G, H, I, outer view; B, C, F, dorso-lateral view; E, inner view.
Fig. 3 in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 3. Frontal view of cephalothorax. A, Chiromantes haematocheir, lectotype male (33.7 × 29.7 mm) (RMNH-D160), Japan; B, Orisarma dehaani, lectotype male (39.5 × 35.7 mm) (RMNH-D157), Japan; C, O. neglectum, neotype male (35.6 × 31.8 mm) (ZRC 1998.310), Shanghai, China; D, O. intermedium, male (27.1 × 25.2 mm) (ZRC 1970.2.23.6), Japan; E, O. sinense, male (29.6 × 25.4 mm) (ZRC 1998.1204), Shanghai, China; F, O. patshuni, male (14.2 × 13.0 mm) (ZRC 1998.345), Hong Kong.
Fig. 11. A–G in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 11. A–G, Orisarma dehaani, lectotype male (39.5 × 35.7 mm) (RMNH-D157), Japan; H–L, O. neglectum, neotype male (35.6 × 31.8 mm) (ZRC 1998.310), Shanghai, China; M–P, O. magnum, holotype male (47.2 × 52.2 mm) (CBM-ZC 11452), Ogasawara Island, Japan. A, H, male pleon; B, anterior thoracic sternites 1–4; C, I, N, left G1 (ventral view, denuded); D, J, left G1 (dorsal view, denuded); E, K, O, left distal part of G1 (ventral view, denuded); F, L, P, left distal part of G1 (dorsal view, denuded); G, left G2 (denuded); M, male pleonal somite 6 and telson; M–P, after Komai & Ng (2013: fig. 5A, C, D, E). Scales: A, B, H = 5.0 mm; C, D, G, I, J = 2.0 mm; E, F, K, L = 1.0 mm.
Fig. 4. A, F in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 4. A, F, Orisarma dehaani, male (36.4 × 34.4 mm) (ZRC 2011.1027), Kumejima Island, Japan; B, D, O. dehaani, male (27.6 × 29.6 mm) (ZRC 2002.0223), Hong Kong; C, E, G, O. neglectum, male (31.7 × 28.0 mm) (ZRC 1998.309), Shanghai, China; H, J, O. intermedium, male (29.5 × 26.5 mm) (ZRC 2001.0034), Pingtung, Taiwan; I, K, O. sinense, male (30.7 × 26.7 mm) (ZRC 2010.0421), China. A–C, dorsal view of carapace; D, E, H, I, frontal and anterolateral margins; F, G, J, K, frontal view of cephalothorax.
Fig. 8. Right third and fourth ambulatory legs. A in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 8. Right third and fourth ambulatory legs. A, Orisarma intermedium, male (27.0 × 25.0 mm) (ZRC 2013.0140), Kyushu, Japan; B, O. intermedium, male (29.5 × 26.5 mm) (ZRC 2001.0034), Pingtung, Taiwan; C, O. intermedium, male (37.5 × 35.8 mm) (ZRC 2014.0265), Kumejima Island, Japan; D, O. sinense, male (30.7 × 26.7 mm) (ZRC 2010.0421), China.
Fig. 2. Overall habitus. A in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 2. Overall habitus. A, Orisarma intermedium, lectotype male (23.0 × 19.9 mm) (RMNH-D165), Japan; B, O. intermedium, male (27.1 × 25.2 mm) (ZRC 1970.2.23.6), Japan; C, O. intermedium, male (27.0 × 25.0 mm) (ZRC 2013.0140), Kyushu, Japan; D, O. intermedium, male (29.5 × 26.5 mm) (ZRC 2001.0034), Pingtung, Taiwan; E, O. intermedium, male (34.2 × 30.7 mm) (ZRC 2001.0034), Pingtung, Taiwan; F, O. intermedium, male (37.5 × 35.8 mm) (ZRC 2014.0265), Kumejima Island, Japan; G, O. sinense, lectotype male (19.0 × 16.6 mm) (MNHN-BP3635a), China; H, O. sinense, paralectotype female (18.8 × 16.9 mm) (MNHN-BP3635b), China; I, O. sinense, male (30.7 × 26.7 mm) (ZRC 2010.0421), China; J, Orisarma sinense, male (29.6 × 25.4 mm) (ZRC 1998.1204), Shanghai, China.
Fig. 1 in Molecular Systematics of Mouse Opossums (Didelphidae: Marmosa): Assessing Species Limits using Mitochondrial DNA Sequences, with Comments on Phylogenetic Relationships and Biogeography
Fig. 1. Provenance of sequenced specimens of Marmosa (localities of sequenced outgroup specimens are not shown). Numbers refer to entries in the Gazetteer (appendix).
Fig. 3 in Molecular Systematics of Mouse Opossums (Didelphidae: Marmosa): Assessing Species Limits using Mitochondrial DNA Sequences, with Comments on Phylogenetic Relationships and Biogeography
Fig. 3. The maximum-likelihood tree inferred from the best-fit model of nucleotide substitution (table 4). ML bootstrap support values and Bayesian posterior probabilities are indicated above and below branches, respectively. Branch and terminal labels follow the same conventions explained in the caption to figure 2.
Fig. 2 in Molecular Systematics of Mouse Opossums (Didelphidae: Marmosa): Assessing Species Limits using Mitochondrial DNA Sequences, with Comments on Phylogenetic Relationships and Biogeography
Fig. 2. Strict consensus of 96 equally most-parsimonious trees (L 5 2198; CI 5 0.36; RI 5 0.80). Bootstrap support values are indicated above branches subtending species and conspecific haplogroups discussed in the text. For each terminal, country of origin, next-largest political unit (state, department, province, etc.), and an alphanumeric specimen identifier (from table 2) are provided. Numbers in parentheses refer to localities mapped in figure 1 and listed in the Gazetteer (appendix).
Figure 9 in Phylogenetic relationships of thorny catfishes (Siluriformes: Doradidae) inferred from molecular and morphological data
Figure 9. Unrooted maximum parsimony trees of Doradidae inferred from molecular and morphological data. (A) Molecular tree based on 3833 bp of 12S, 16S and EF1a exons + introns sequence data; the black star indicates the hypothetical attachment point of the root (see Fig. 7). (B) Morphological tree based on 95 morphological characters (Higuchi, 1992); the black star indicates the hypothetical attachment point of the root (see Fig. 1). Numbers at nodes are bootstrap percentages based on 1000 pseudoreplicates. Support values <50% are not shown.
Figure 8 in Phylogenetic relationships of thorny catfishes (Siluriformes: Doradidae) inferred from molecular and morphological data
Figure 8. Maximum likelihood tree of Doradidae inferred from analysis of combined 12S, 16S and EF1a (exons + introns) sequence data. Numbers at nodes represent percentage Bayesian posterior probabilities, ML bootstrap (500 pseudoreplicates) and MP bootstrap (1000 pseudoreplicates). This is an unrooted tree; the black star indicates the hypothetical attachment point of the root (see Fig. 7).
Figure 2. Proposed 12S in Phylogenetic relationships of thorny catfishes (Siluriformes: Doradidae) inferred from molecular and morphological data
Figure 2. Proposed 12S rRNA secondary structure model for Doradidae. Single bases enclosed in squares indicate positions thought to be involved in the decoding mechanism.
Figure 1 in Phylogenetic relationships of thorny catfishes (Siluriformes: Doradidae) inferred from molecular and morphological data
Figure 1. Higuchi's (1992) phylogeny of Doradidae based on osteological characters. Subfamilies are labelled on the right. Unpublished genus–group names are indicated by A, B and C.
Figure 2. Phylogenetic relationships among the 29 in Molecular phylogeny and phylogeography of the Greek populations of the genus Orthometopon (Isopoda, Oniscidea) based on mitochondrial DNA sequences
Figure 2. Phylogenetic relationships among the 29 specimens of Orthometopon species. Individuals from two other terrestrial isopod species were used as outgroup taxa: Ligidium sp. and Armadillidium vulgare. Phylogenetic analyses, maximum parsimony (MP), maximum likelihood (ML), and Bayesian inference (BI), all produced trees with the same topology. Only the BI tree is presented here. Numbers above the branches indicate bootstrap values in the MP and ML analyses, respectively (MP/ML). Numbers below the branches indicate the posterior probabilities of the Bayesian analysis (BI).
Figure 4 in Phylogenetic relationships and evolution of Orbiniidae (Annelida, Polychaeta) based on molecular data
Figure 4. Most parsimonious tree (tree length = 2641, CI = 0.5388) of the maximum parsimony analysis of the combined dataset. The values at each node represent the MP bootstrap support. Taxa which are discussed in detail in the discussion are in bold type.
Figure 3 in Phylogenetic relationships and evolution of Orbiniidae (Annelida, Polychaeta) based on molecular data
Figure 3. Maximum likelihood tree of the mitochondrial 16S rRNA gene dataset based on the GTR + G model of sequence evolution (–lnL = 3943.65274). The first value at each node represents the ML bootstrap support, the second the Bayesian posterior probability. Taxa which are discussed in detail in the discussion are in bold type.
Figure 40 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 40. Phylogenetic hypothesis for Bullidae species based on Bayesian inference analysis of COI gene sequences. Numbers above branches are posterior probabilities expressed as percentages. Outgroups have been removed from the tree.
Figure 35 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 35. Male genital system (with details of prostate and penial duct) of Bulla ampulla (A–H) and B. arabica sp. nov. (I–K). A, B, Umhlali, South Africa (NM Moll w2407; H = 38.3 mm). C, D, Taolagnaro, Madagascar (BNMH 20030672; H = 41.0 mm). E, New Britain, Papua New Guinea (ZMB 38888; H = 33.6 mm). F, G, Tuticorin, India (BMNH 20050164; H = 41.6 mm). H, Nacala, Mozambique (BMNH 20060528; H = 47.8 mm). I, Red Sea (ZMB 789; H = 25.5 mm). J, Khasab, Oman (BMNH 20060565; H = 35.9 mm). K, Ras al- Khaimah, United Arab Emirates (BMNH 20060101; H = 42.2 mm).
Figure 32 in Systematic revision of the living species of Bullidae (Mollusca: Gastropoda: Cephalaspidea), with a molecular phylogenetic analysis
Figure 32. Rachidian teeth of radula of Bulla ampulla (A, B), B. arabica sp. nov. (C), B. orientalis (D), B. quoyii (E) and B. vernicosa (F). A, Umhlali, South Africa (NM W2407; H = 38.7 mm). B, Abrolhos Islands, Western Australia (WAM S19151; H = 45.4 mm). C, Ras al-Khaimah, United Arab Emirates (BMNH 20060102; H = 39.6). D, Okinawa, Japan (BMNH 20040859; H = 22.0 mm). E, Albany, Western Australia (WAM S19095; H = 45.9 mm). F, Panglao, Philippines (MNHN, Paris; H = 27.7 mm). Scale bars: A–D, F = 200 Mm; E = 500 Mm.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.