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249
datasets available to search
ShareScore release 0.7.1
Dataset results
249 results for “plant pathogen”
Comparative transcriptomics reveal contrasting fungal strategies in a plant pathogen (Fusarium graminearum) versus an endophyte (Metarhizium anisopliae) during initial host colonization
GEO Series GSE277787. Fusarium graminearum. 24 samples. Type: Expression profiling by high throughput sequencing.
Target specificity amongst canonical nuclear poly(A) polymerases in plants modulates organ growth and pathogen response
GEO Series GSE48821. Arabidopsis thaliana. 8 samples. Type: Expression profiling by array.
Transcriptomic changes in the PacC transcription factor deletion mutant of the plant pathogenic fungus Botrytis cinerea
GEO Series GSE265877. Botrytis cinerea B05.10. 12 samples. Type: Expression profiling by high throughput sequencing.
Multidimensional gene regulatory landscape of a bacterial pathogen in plants
GEO Series GSE138901. Pseudomonas syringae pv. tomato str. DC3000. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacterial Serratia proteamaculans and Serratia plymuthica
GEO Series GSE66652. Rhizoctonia solani AG-3 Rhs1AP. 9 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq time-course analysis of the transcriptional dynamics of the two root-infecting fungi Colletotrichum tofieldiae (mutualistic) and Colletotrichum incanum (pathogenic) and their plant host Arabid
GEO Series GSE70094. Arabidopsis thaliana; Colletotrichum tofieldiae; Colletotrichum incanum. 63 samples. Type: Expression profiling by high throughput sequencing.
Global transcriptome of Helianthus annuus, Beta vulgaris, Ricinus communis and Phaseolus vulgaris healthy plants and plant infected by the fungal pathogen Sclerotinia sclerotiorum (strain 1980)
GEO Series GSE138039. Beta vulgaris subsp. vulgaris; Helianthus annuus; Phaseolus vulgaris; Ricinus communis. 24 samples. Type: Expression profiling by high throughput sequencing.
microRNA-like RNAs exploring and expression profile in plant pathogenic fungus Fusarium oxysporum f. sp. niveum
GEO Series GSE84384. Fusarium oxysporum f. sp. niveum. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Transcriptome analysis indicates the involvement of herbicide-responsive and plant–pathogen interaction pathways in the development of resistance to ACCase inhibitors in Apera spica-venti
GEO Series GSE204857. Apera spica-venti. 32 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq based transcriptome analysis of plant pathogens under salt stress condition
GEO Series GSE272984. Ralstonia solanacearum; Pectobacterium carotovorum subsp. carotovorum; Burkholderia gladioli. 18 samples. Type: Expression profiling by high throughput sequencing.
Data from: QTL mapping of temperature sensitivity reveals candidate genes for thermal adaptation and growth morphology in the plant pathogenic fungus Zymoseptoria tritici
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Data from: Variable competitive effects of fungicide resistance in field experiments with a plant pathogenic fungus
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Data from: Adaptation of the pathogen, Pseudomonas syringae during experimental evolution on a native versus alternative host plant
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The ubiquitin-dependent N-end rule pathway enhances pathogen responses in plants
GEO Series GSE80275. Arabidopsis thaliana. 30 samples. Type: Expression profiling by array.
O antigen acts as a shield to delay early plant immune recognition of the pathogenic bacterium, Xylella fastidiosa
GEO Series GSE87643. Vitis vinifera. 99 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic study of the response of the maize pathogen Cochliobolus heterostrophus to a plant phenolic, ferulic acid
GEO Series GSE125235. Bipolaris maydis. 32 samples. Type: Expression profiling by high throughput sequencing.
Time-resolved genome-wide pathogenic gene expression analysis of the plant pathogen Xanthomonas oryzae pv. oryzae (Xoo) via RNA-Seq
GEO Series GSE154542. Xanthomonas oryzae pv. oryzae. 6 samples. Type: Expression profiling by high throughput sequencing.
Genomic innovation and horizontal gene transfer shaped plant colonization and biomass degradation strategies of a globally prevalent fungal pathogen
GEO Series GSE233220. Eucalyptus grandis; Armillaria luteobubalina. 28 samples. Type: Expression profiling by high throughput sequencing.
H3K27me3 is vital for fungal development and secondary metabolite gene silencing, and substitutes for the loss of H3K9me3 in the plant pathogen Fusarium proliferatum
GEO Series GSE235901. Fusarium proliferatum. 4 samples. Type: Expression profiling by high throughput sequencing.
Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum
GEO Series GSE68547. Pectobacterium atrosepticum SCRI1043. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.