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336 results for “plastic response”
Data from: Within-individual plasticity explains age-related decrease in stress response in a short-lived bird
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Architectural plasticity in response to population density in Abutilon theophrasti (Malvaceae)
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Contribution of genetic versus plastic responses to adaptive patterns in a widespread butterfly along a latitudinal cline
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Data from: Transgenerational plasticity responses of oysters to ocean acidification differ with habitat
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Competition alters species' plastic and genetic response to environmental change
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Data from: Short-term physiological plasticity: trade-off between drought and recovery responses in three Mediterranean Cistus species
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Data from: Adult plasticity in African Cichlids: rapid changes in opsin expression in response to environmental light differences
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Data from: Plasticity of thermoregulatory behaviour in response to the thermal environment by widespread and alpine reptile species
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Data from: Functional modularity and mechanical stress shape plastic responses during fish development
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Associations among cotyledon developmental stability, canalization and phenotypic plasticity in response to shading and burial depth in five herbaceous species at early seedling stage
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Species responses to changing precipitation depends on trait plasticity rather than trait means and intraspecific variation
<p>1. Trait-based approaches are key to develop mechanistic understanding of differences in plant species performance under environmental change. While mean trait values have been widely used to link functional traits to species performance, the contribution of intraspecific trait variation and trait plasticity remains unclear. Moreover, environmentally induced changes in species biomass is caused by changes in the number of individuals and individual growth rate, both of which should be influenced by trait differences and plasticity. Our goal in this study is to use trait-based information to explain species performance via changes in species abundance and individual weight.</p> <p>2. We measured the mean, intraspecific variation and plasticity of nine aboveground plant traits, and a further three mean root traits of ten common species in a precipitation manipulation experiment in semiarid grassland. We used this trait information to explain differences in the responses of species biomass, abundance and mean individual weight to changing precipitation. Species responses were calculated as the normalized slopes of the regressions between species biomass, abundance and individual weight with the manipulated precipitation amount.</p> <p>3. We found strong differences in species responses to changing precipitation for species biomass, abundance and mean individual weight. Reduced precipitation decreased biomass, abundance and mean individual weight for some species, but increased them for others. Biomass and mean individual weight of species with resource-acquisitive traits, such as shallow rooted species, showed stronger positive responses to changing precipitation compared to resource-conservative traits, like those with deep roots. For aboveground traits, trait plasticity was the strongest predictor of species responses compared to mean traits and intraspecific trait variation. In addition, trait plasticity regulated changes in species biomass more via changes in species abundance than mean individual weight.</p> <p>4. These results indicate that trait plasticity is a key driver for determining species specific responses to changing precipitation and needs more consideration for understanding and predicting ecosystem structure and functioning in future climate scenarios.</p>
Transcriptome assembly for: Genetic compensation rather than genetic assimilation drives the evolution of plasticity in response to mild warming across latitudes in a damselfly
<p><span>Global warming is causing plastic and evolutionary changes in the phenotypes of ectotherms. Yet, we have limited knowledge on how the interplay between plasticity and evolution shapes thermal responses and underlying gene expression patterns. We assessed thermal reaction norm patterns across the transcriptome and identified associated molecular pathways in northern and southern populations of the damselfly <i>Ischnura elegans</i>. Larvae were reared<i> </i>in a common garden experiment at the mean summer water temperatures experienced at the northern (20 °C) and southern (24 °C) latitudes. This allowed a space-for-time substitution where the current gene expression levels at 24 °C in southern larvae are a proxy for the expected responses of northern larvae under gradual thermal evolution to the predicted 4 °C warming. Most differentially expressed genes showed fixed differences across temperatures between latitudes, suggesting that thermal genetic adaptation will mainly evolve through changes in constitutive gene expression. Northern populations also frequently showed plastic responses in gene expression to mild warming, while southern populations were much less responsive to temperature. Thermal responsive genes in northern populations showed to a large extent a pattern of genetic compensation, i.e. gene expression that was induced at 24 °C in northern populations remained at a lower constant level in southern populations, and were associated with metabolic and translation pathways. There was instead little evidence for genetic assimilation of an initial plastic response to mild warming. Our data therefore suggest that genetic compensation rather than genetic assimilation may drive the evolution of plasticity in response to mild warming in this damselfly species.</span></p>
Data from: Evolution of root plasticity responses to variation in soil nutrient distribution and concentration
Root plasticity, a trait that can respond to selective pressure, may help plants forage for nutrients in heterogeneous soils. Agricultural breeding programs have artificially selected for increased yield under comparatively homogeneous soil conditions, potentially decreasing the capacity for plasticity in crop plants like barley (Hordeum vulgare). However, the effects of domestication on the evolution of root plasticity are essentially unknown. Using a split container approach, we examined differences in root plasticity among three domestication levels of barley germplasm (wild, landrace, and cultivar) grown under different concentrations and distribution patterns of soil nutrients. Domestication level, nutrient concentration, and nutrient distribution interactively affected average root diameter; differential root allocation (within-plant plasticity) was greatest in wild barley (H. spontaneum), especially under low nutrient levels. Correlations of within-plant root plasticity and plant size were most pronounced in modern cultivars under low nutrient conditions. Barley plants invested more resources to root systems when grown in low nutrient soils and allocated more roots to higher nutrient locations. Root plasticity in barley is scale dependent and varies with domestication level. Although wild barley harbors a greater capacity for within-plant root plasticity than domesticated barley, cultivars exhibited the greatest capacity to translate within-plant plasticity into increased plant size.
Data from: Developmental plasticity of the stress response in female but not male guppies
To survive, animals must respond appropriately to stress. Stress responses are costly, so early-life experiences with potential stressors could adaptively tailor adult stress responses to local conditions. However, how multiple stressors influence the development of the stress response remains unclear, as is the role of sex. Trinidadian guppies (Poecilia reticulata) are small fish with extensive life history differences between the sexes and population variation in predation pressure and social density. We investigated how sex and early-life experience influence hormonal stress responses by manipulating conspecific density and perceived predation risk during development. In adults, we sampled cortisol twice to measure initial release and change over time in response to a recurring stressor. The sexes differed considerably in their physiological stress response. Males released more cortisol for their body mass than females and did not reduce cortisol release over time. By contrast, all females, except those reared at high density with predation cues, reduced cortisol release over time. Cortisol responses of males were less dynamic in response to current circumstances and early-life experiences than females, consistent with life history differences between the sexes. Our study underscores the importance of early-life experiences, interacting ecological factors, and sex differences in the organization of the stress response.
Data from: Antagonistic responses of exposure to sublethal temperatures: adaptive phenotypic plasticity coincides with a reduction in organismal performance
A fitness benefit of phenotypic plasticity is the ability of an organism to survive short-term, deleterious environmental fluctuations. Yet, the influence of selection on plasticity in modulating shifts in phenotypic traits remains unclear. Short-term phenotypic plasticity in thermal tolerance traits is attained by exposure to sublethal hot or cold temperatures (i.e. the hardening response). Heat hardening is expected to buffer organisms from the unpredictability of extreme thermal fluctuations in the environment so as to minimize interruptions in activity and enhance survival. However, exposure to sublethal temperatures might entail other phenotypic costs that constrain or inhibit the prolonged use of hardening responses across longer timescales. Here, we estimated the onset of the heat hardening response, physiological and behavioral shifts during heat hardening, and geographic variation in heat hardening using tree lizards (Urosaurus ornatus). Peak heat hardening occurred 6h after exposure to sublethal temperatures. We found that both preferred body temperatures and locomotor performance diminished following exposure to sublethal temperatures, and performance levels did not approach pre-exposure levels until after the peak hardening response. We also found support for intraspecific variation in the hardening response along an environmental gradient, where populations in more thermally variable environments exhibited stronger plastic responses and populations with higher baseline heat tolerances exhibited weaker plastic responses. Sublethal temperature exposure might induce plasticity in thermal tolerance, however we have characterized other phenotypic shifts that might curtail chronic reliance on plasticity in thermal traits as a mechanism of responding to changes in thermal environments induced by climate warming.
Data from: Plastic responses of some life history traits and cellular components of body size in Aphidius ervi as related to the age of its host Acyrthosiphon pisum
Phenotypic plasticity of wing size and shape has been evaluated in Aphidius ervi developing in its host, Acyrthosiphon pisum, parasitized at seven different ages. The parasitoid wing size was used as an estimator of both whole body size and its cellular composition. No size difference was observed in A. ervi adults emerged from aphids 1, 2 or 3 days old at parasitization. Body size then increased in A. ervi emerged from hosts older at parasitization. Body size values as related to host age at parasitization were achieved by adjusting developmental time, developmental rate or both. Parasitoids of similar size, but developed in hosts parasitized at different ages, had different wing cellular composition, while the increase of parasitoid body size was related to a general increase in both cell area and cell number. These results seem to suggest a trade-off between adult size and developmental time, at least for parasitoids developed at the two extremes of host ages at parasitization, and that A. ervi can reach the same adult size via different trajectories, adapting its ontogenetic processes. Wing shape was typical for all the different parasitoid classes considered and differed strongly between males and females, independent of their size. Parasitoid males (haploids) and females (diploids) did not differ in either cell area or cell number, suggesting a possible sex-determined dosage compensation in somatic tissue endoreplication.
Data from: Does phenotypic plasticity for adult size versus food level in Drosophila melanogaster evolve in response to adaptation to different rearing densities?
Recent studies using inbred lines of Drosophila have suggested that there is extensive genetic variability for phenotypic plasticity of body size versus food level. If true, we expect that the outcome of evolution at very different food levels should yield genotypes whose adult sizes show different patterns of phenotypic plasticity. We have tested this prediction with six independent populations of Drosophila melanogaster kept at extreme (low vs. high) densities for 125 generations. We found that the phenotypic plasticity of body size versus food level is not affected by selection or the presence of competitors of a different genotype. However, we document increasing among population variation in phenotypic plasticity due to random genetic drift. Several reasons are explored to explain these results including the possibility that the use of highly inbred lines to make inferences about the evolution of genetically variable populations may be misleading.
Data from: Evolution of phenotype-environment associations by genetic responses to selection and phenotypic plasticity in a temporally autocorrelated environment
Covariation between population-mean phenotypes and environmental variables, sometimes termed a 'phenotype-environment association' (PEA), can result from phenotypic plasticity, genetic responses to natural selection, or both. PEAs can potentially provide information on the evolutionary dynamics of a particular set of populations, but this requires a full theoretical characterization of PEAs and their evolution. Here, we derive formulas for the expected PEA in a temporally fluctuating environment for a quantitative trait with a linear reaction norm. We compare several biologically relevant scenarios, including constant versus evolving plasticity, and the situation where an environment affects both development and selection but at different time periods. We find that PEAs are determined not only by biological factors (e.g., magnitude of plasticity, genetic variation), but also environmental factors, such as the association between the environments of development and of selection, and in some cases the level of temporal autocorrelation. We also describe how a PEA can be used to estimate the relationship between an optimum phenotype and an environmental variable (i.e., the environmental sensitivity of selection), an important parameter for determining the extinction risk of populations experiencing environmental change. We illustrate this ability using published data on the predator-induced morphological responses of tadpoles to predation risk.
Data from: Multiple simultaneous treatments change plant response from adaptive parental effects to within-generation plasticity, in Arabidopsis thaliana
In general, studies on plant phenotypic plasticity concentrate on plant responses to different levels of a single environmental factor. Under natural conditions, however, multiple environmental factors often vary simultaneously. I studied the consequences for lifetime fitness caused by single treatments or treatment combinations by investigating patterns of phenotypic plasticity within and between generations. The parental plants (3 genotypes of the annual plant Arabidopsis thaliana) received zero, one or two stress treatments at an early life-stage. The treatments included wounding, shading, chilling, and their pairwise combinations. In the second generation, offspring of treated plants received either the parental or no treatment. Offspring of non-treated plants were reared under all treatment conditions. Plants responded strongly to the treatments, especially through delayed reproduction, which positively affected lifetime fitness. Notably, treatment combinations triggered stronger plastic responses on average. Because the delay in reproduction was offset by a delay in senescence, the treatments resulted in a fitness gain instead of a loss. However, under adverse environmental conditions, this delay represents a potential fitness cost, especially when the time for reproduction is limited. The treatments wounding and shading triggered parental effects that increased fitness only in plants that themselves received the treatment. Untreated offspring of wounded or shaded parents performed like control plants. Also, these parental effects were not accompanied by potential fitness costs, such as delayed reproduction. Chilling triggered genotype-specific parental effects that increased or reduced fitness. Of the treatment combinations only wounding and shading resulted in genotype-specific parental effects that increased or reduced fitness independently of offspring treatment. These results suggest that the response of annual plants to treatment combinations triggers predominantly within-generation plastic responses that include potential fitness costs, which cannot be inferred from studies that manipulate environmental factors individually. Therefore, single treatment studies likely underestimate the costs of plasticity in natural environments.
Data from: Variation in plastic responses of a globally distributed picoplankton species to ocean acidification
Phytoplankton are the basis of marine food webs, and affect biogeochemical cycles. As CO2 levels increase, shifts in the frequencies and physiology of ecotypes within phytoplankton groups will affect their nutritional value and biogeochemical function. However, studies so far are based on a few representative genotypes from key species. Here, we measure changes in cellular function and growth rate at atmospheric CO2 concentrations predicted for the year 2100 in 16 ecotypes of the marine picoplankton Ostreococcus. We find that variation in plastic responses among ecotypes is on par with published between-genera variation, so the responses of one or a few ecotypes cannot estimate changes to the physiology or composition of a species under CO2 enrichment. We show that ecotypes best at taking advantage of CO2 enrichment by changing their photosynthesis rates most should increase in relative fitness, and so in frequency in a high-CO2 environment. Finally, information on sampling location, and not phylogenetic relatedness, is a good predictor of ecotypes likely to increase in frequency in this system.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.