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223
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ShareScore release 0.9.0
Dataset results
223 results for “retinoblastoma”
Profiling the transcriptional heterogeneity of diverse pediatric solid tumors - Retinoblastoma
For more information, including a more complete description, data generator contact information, and reference, please see: https://scpca.alexslemonade.org/projects/SCPCP000011.
Retinoblastoma Aqueous Humor Liquid Biopsy Repository
This study involves the use of the aqueous humor (AH, the clear fluid in the front of the eye) as an organ specific liquid biopsy for retinoblastoma. This relatively new liquid biopsy platform was started at CHLA/USC and was developed to overcome the lack of tumor tissue -- due to contraindication to biopsy -- for this cancer. We have demonstrated that the aqueous humor is an enriched source of tumor DNA. Previously tumoral information was only available after the eye was removed for treatment failure. Due to the AH liquid biopsy, we are now able to assay tumor derived molecular information from these eyes at diagnosis and longitudinally during treatment -- as opposed to only eyes that have failed therapy. We have demonstrated that using the platform we can identify the specific mutations in the RB1 gene that initiate tumorigenesis in this cancer as well as the secondary chromosomal alterations the drive further tumor growth. This database will provide sequencing information as well as associated clinical information and globe salvage outcomes.
Transcriptome analysis of bisphenol A (BPA) treated Y79 human retinoblastoma cells
GEO Series GSE146255. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Differential expression of miRNAs in Retinoblastoma cells (Y79) in response to anti-HMGA2 siRNA treatment
GEO Series GSE51696. Homo sapiens. 4 samples. Type: Non-coding RNA profiling by array.
Extrachromosomal circular SUZ12 amplicon dictates retinoblastoma progression through reprogramming H3K27 methylation [eccDNA-seq]
GEO Series GSE235888. Homo sapiens. 5 samples. Type: Other.
Genome-wide analysis of fatty acid synthase (FASN) gene silenced retinoblastoma cancer cells (WERI RB1) using cDNA microarray analysis
GEO Series GSE63746. Homo sapiens. 8 samples. Type: Expression profiling by array.
FoxM1-Retinoblastoma Interaction Induces Tumor Microenvironment That Drives Metastasis
GEO Series GSE178612. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Whole genome microarray of T lymphoma invasion and metastasis (Tiam1) silenced retinoblastoma Y79 cells
GEO Series GSE45130. Homo sapiens. 6 samples. Type: Expression profiling by array.
Synthetic lethality between Rb, p53 and miR-17~92 in retinal progenitors suppresses retinoblastoma formation_murine data
GEO Series GSE39106. Mus musculus. 23 samples. Type: Expression profiling by RT-PCR.
Effect of CDK7 inhibitor on MYCN-amplified retinoblastoma
GEO Series GSE236205. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Epigenome screening for genes regulated by retinoblastoma-binding protein 4 (RBBP4) in glioblastoma (GBM) cells
GEO Series GSE72476. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
MicroRNA expression profile from retinoblastoma tumors and pediatric controls
GEO Series GSE208677. Homo sapiens. 30 samples. Type: Non-coding RNA profiling by array.
Extrachromosomal circular SUZ12 amplicon dictates retinoblastoma progression through reprogramming H3K27 methylation [CUT&Tag]
GEO Series GSE239785. Homo sapiens. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Characterization and molecular mechanistic study of a therapeutic peptide functionalized nanobioconjugate inhibiting the p53-HDM2 interaction in Retinoblastoma
GEO Series GSE92987. Homo sapiens. 9 samples. Type: Expression profiling by array.
Enhanced Innate Response In RB1 deficient Microglia Derived From Retinoblastoma Patient
GEO Series GSE212248. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Expression data from coculture of retinoblastoma (RB) and bone marrow stromal cells (BMSC)
GEO Series GSE130724. Homo sapiens. 12 samples. Type: Expression profiling by array.
PA-seq of retinoblastoma and retina
GEO Series GSE224022. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Synthetic lethality between Rb, p53 and miR-17~92 in retinal progenitors suppresses retinoblastoma formation
GEO Series GSE39107. Homo sapiens; Mus musculus. 59 samples. Type: Expression profiling by RT-PCR.
Transcriptome analysis of Y79 retinoblastoma cells upon Lysyl oxidase propeptide (LOX-PP) overexpression
GEO Series GSE119413. Homo sapiens. 4 samples. Type: Expression profiling by array.
NSUN2-mediated 5-methylcytosine enhances purine metabolism through ALYREF in retinoblastoma
GEO Series GSE214685. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing; Other.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.