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271
datasets available to search
ShareScore release 0.9.0
Dataset results
271 results for “scATAC”
Decoding Trp53 regulatory program with knockout cell epigenomic landscape analyses [scATAC-seq]
GEO Series GSE217661. Mus musculus. 94 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Canonical BAF complex orchestrates mesenchymal stem cell niche composition and fate via cofactor-guided chromatin remodeling [scATAC-seq]
GEO Series GSE298609. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Developmental cues license emergency megakaryopoiesis in hematopoietic stem cells [scATAC-seq]
GEO Series GSE161724. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell analysis of accessible chromatin using scATAC-seq and transcriptome analysis using RNA-seq in human mammary epithelial cells
GEO Series GSE161628. Homo sapiens. 306 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
The Regulatory Logic of Planarian Stem Cell Differentiation [scATAC-Seq]
GEO Series GSE274281. Schmidtea mediterranea. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-nuclei ATAC-Seq profiles from Group 3 and Group 4 medulloblastomas [scATAC-Seq]
GEO Series GSE253573. Homo sapiens. 33 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mapping disease-associated regulatory circuits by cell type from single-cell multiomics data (S. aureus scATAC-seq)
GEO Series GSE220188. Homo sapiens. 44 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-Cell Multiomics Reveals Distinct Cell States at the Top of the Human Hematopoietic Hierarchy [scATAC-seq]
GEO Series GSE173075. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Differential chromatin accessibility in peripheral blood mononuclear cells underlies COVID-19 disease severity prior to seroconversion [scATAC-Seq]
GEO Series GSE206455. Homo sapiens. 42 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Klf6 is required in thymic epithelial cells for normal thymus development [scATAC-seq]
GEO Series GSE221073. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [scATAC-Seq]
GEO Series GSE173557. Mus musculus. 1097 samples. Type: Expression profiling by high throughput sequencing.
NR4a1/2 deletion promotes accumulation of TCF1+ stem-like precursors of exhausted CD8+ T cells in the tumor microenvironment [scATAC-seq]
GEO Series GSE242052. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
EPICARDIOID SINGLE-CELL GENOMICS UNCOVER PRINCIPLES OF HUMAN EPICARDIUM BIOLOGY IN HEART DEVELOPMENT AND DISEASE [scATAC-Seq]
GEO Series GSE196512. Homo sapiens. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Integration of scRNA-seq and scATAC-seq reveals malignant characteristics of clear cell renal cell carcinoma with sarcomatoid differentiation
GEO Series GSE291824. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Ikaros is a principal regulator of Aire+ mTEC homeostasis, thymic mimetic cell diversity, and central tolerance [Ikaros scATAC-seq]
GEO Series GSE238149. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mapping disease-associated regulatory circuits by cell type from single-cell multiomics data (COVID-19 scATAC-seq)
GEO Series GSE222548. Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Atlas of lymphangiogenesis [scATAC-Seq]
GEO Series GSE188340. Danio rerio. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair [scATAC-seq]
GEO Series GSE264098. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Determination of dynamic changes in chromatin accessibilty during cellular reprogramming [scATAC]
GEO Series GSE85580. Homo sapiens. 480 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Dynamic enhancer landscapes in human craniofacial development [scATAC-seq]
GEO Series GSE235756. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.