Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,913
datasets available to search
ShareScore release 0.9.0
Dataset results
1,913 results for “single cell RNA sequencing”
Identification of a distinct luminal subgroup diagnosing and stratifying early stage prostate cancer by tissue-based single-cell RNA sequencing
GEO Series GSE157703. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-sequencing resolves IL-4 and IFN-γ into distinct inflammatory trajectories within GM-CSF macrophages
GEO Series GSE304596. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing of CD42+ and CD42- iHPC in RUNX1 haploinsufficiency
GEO Series GSE149136. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Cellular basis of omentum activation and expansion revealed by single-cell RNA sequencing using a parabiosis model
GEO Series GSE176254. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-sequencing of bovine fetal gonads using 10x Genomics
GEO Series GSE162952. Bos taurus. 2 samples. Type: Expression profiling by high throughput sequencing.
Spontaneous induction of neural crest cells in human pluripotent stem cell-derived aggregates revealed by single-cell RNA sequencing
GEO Series GSE199158. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing of lung tissues from non-irradiated wild-type, irradiated conditional knockout with drug treatment, and irradiated wild-type mice
GEO Series GSE308881. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Spatiotemporal Developmental Trajectories in the Arabidopsis Root Revealed Using High-Throughput Single Cell RNA Sequencing
GEO Series GSE123818. Arabidopsis thaliana. 7 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing of peanut-responsive T cells
GEO Series GSE98852. Homo sapiens. 431 samples. Type: Expression profiling by high throughput sequencing.
Temporally resolved single-cell RNA sequencing reveals protective and pathological responses during herpes simplex virus 1 CNS infection
GEO Series GSE283518. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Complex cell-state changes revealed by single cell RNA sequencing of 76,149 microglia throughout the mouse lifespan and in the injured brain
GEO Series GSE121654. Mus musculus. 47 samples. Type: Expression profiling by high throughput sequencing.
YAP-Driven Malignant Reprogramming of Oral Epithelial Stem Cells, 3' single cell RNA sequencing
GEO Series GSE276783. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-sequencing of human intestinal organoid cells
GEO Series GSE242765. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing of primary-isolated erythroid progenitors [daughter cells]
GEO Series GSE117232. Mus musculus. 52 samples. Type: Expression profiling by high throughput sequencing.
Scalable ultra-high-throughput single-cell chromatin and RNA sequencing reveals gene regulatory dynamics linking macrophage polarization to autoimmune disease.
GEO Series GSE253165. Mus musculus; Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single cell RNA sequencing of human pluripotent stem cells directed toward the amnioblast lineage.
GEO Series GSE214443. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-sequencing of vein grafts in mouse models
GEO Series GSE140879. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-sequencing of tumor associated neutrophils and control peripheral blood neutrophils in a novel lung squamous cell carcinoma mouse model
GEO Series GSE118245. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
single cell RNA sequencing of SMC specific Yap1 knockout mouse aorta
GEO Series GSE213735. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Parallel single-cell bisulfite- and RNA-sequencing link transcriptional and epigenetic heterogeneity
GEO Series GSE74535. Mus musculus. 192 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.