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3,481 results for “data set”
Calorie Harmony Data Set
<p>Sample de-identified dataset from the Calorie Harmony study.</p>
Data sets used in the manuscript titled "Ecosystem-level energy and water budgets are resilient to canopy mortality in sparse semi-arid biomes"
<p><span>This data set reports water and energy fluxes, soil water content and sap fluxes measured at two adjacent pinon-juniper woodlands in central New Mexico from January 2009 to December 2016. This data set was used for the analysis in the manuscript titled "Ecosystem-level energy and water budgets are resilient to canopy mortality in sparse semi-arid biomes" submitted to JGR-Biogeosciences. </span></p>
Hathi: An MCDM-based Approach for the Capacity Planning of Cloud-hosted DBMS — Data Sets
<p>These data sets provide supplemental material for the paper "Hathi: An MCDM-based Approach for<br> the Capacity Planning of Cloud-hosted DBMS" submitted to the 13th IEEE/ACM International<br> Conference on Utility and Cloud Computing.</p>
Atmospheric aerosol, gases and meteorological parameters measured during the LAPSE-RATE campaign - Finnish Meteorological Institute data sets
<p>This publication summarizes the measurements and data sets generated by Finnish Meteorological Institute (FMI) during the LAPSE-RATE that took place in the San Luis Valley of Colorado during the summer of 2018. These data sets offer observations of atmospheric aerosols and gases at the surface and in vertical column acquired by FMI rotary-wing Unmanned Aerial System and FMI ground module. </p>
GPS 50 Hz data set for the case study. Part 2 (Version sbf)
<p>GPS 50 Hz data set for the case study entitled "Comparison of TEC calculations based on Trimble, Javad, Leica and Septentrio GNSS receiver data". Part 2 (Septentrio dataset).</p>
Data set of ICSE 2021 paper submission "Static and Dynamic Analysis for the Migration of Monolith Systems to a Microservices Architecture"
<p>Data set of ICSE 2021 paper submission "Static and Dynamic Analysis for the Migration of Monolith Systems to a Microservices Architecture"</p>
Role of the Cost Function for Material Parameter Estimation - Data Set
<p>##################################################################################################</p> <p><strong>Attention: We found an error in our optimisation template, related to the results that are provided in figure 2. We are working on fixing the issue and upload a corrected version in the upcoming days.</strong></p> <p> </p> <p> </p> <p> </p> <p>Dataset for the contribution "Role of the Cost Function for Material Parameter Determination" to the "<a href="https://www.femtc.com/events/2020/">Fire and Evacuation Modeling Technical Conference</a>" (FEMTC) 2020.</p> <p> </p> <p>It contains:</p> <ul> <li>the complete data of each IMP run,</li> <li>simulations of the best parameter sets of each IMP run,</li> <li>the IMP run for the reaction kinetics parameters,</li> <li>the validation simulations,</li> <li>the plots shown in the article and presentation, as well as</li> <li>the Jupyter Notebooks used for the data analysis.</li> </ul> <p>Note: The copper foil thickness is set to0.2 mm in all simulations, due to a typo in the FDS input file template and should have been 0.025 mm according to the <a href="https://www.sciencedirect.com/science/article/abs/pii/S0379711217300541">article describing CAPA II</a>. A simulation with the correct thickness showed very little divergence from the conducted simulations, thus the effect of the typo is regarded to be neglectable. Therefore, all files in this data repository are using the incorrect initial value. The mentioned simulations and a plot comparing both results are provided in this repository.</p> <p> </p> <p>Version 1.1:</p> <p>Added slides and article.</p>
Supplementary data (simulated metagenome set 1) to accompany "phyloFlash – Rapid SSU rRNA profiling and targeted assembly from metagenomes"
<p>Comparison of SSU rRNA read extraction and targeted assembly from simulated shotgun metagenome of divergent bacterial species.</p> <p>The phyloFlash software is available from https://github.com/HRGV/phyloFlash. Examples were generated with phyloFlash v3.3b.</p>
Benchmark Data Set of "epiTracker - A framework for highly-reliable particle tracking for the quantitative analysis of fish movements in tanks"
<p>Data set containing five videos differing in fish species (zebrafish and medaka), number of individuals (3 to 10), lighting and type of tank for comparison of tracking algorithms. For each video a Matlab file (*.mat) exists, which contains the position data of the fish.</p> <p>Each of the five videos consists of ~10000 frames, which at a frame rate of 30FPS corresponds to a length of about 5.5min.</p>
Data Set of Focus Groups with Industry Representatives on Smart Dust and Micro Robots
<p>Data Set of Focus Groups with Industry Representatives on Smart Dust and Micro Robots</p> <p>This data set comprises the following documents:</p> <ul> <li>Coding scheme</li> <li>Focus group guidelines</li> <li>Focus group 01-03</li> </ul>
Data Set to: Effects of TNFα receptor TNF-Rp55- or TNF-Rp75- deficiency on corneal neovascularization and lymphangiogenesis in the mouse
<p>Data Set to: <strong>Effects of TNFα receptor TNF-Rp55- or TNF-Rp75- deficiency on corneal neovascularization and lymphangiogenesis in the mouse</strong></p> <p>Raw data and image files</p>
Data from: Proportion methylation at a set of CpGs from 4 amplicons
<p><span>The age structure of populations, or the ageing rate of individuals, impacts aspects of animal ecology, epidemiology and conservation. Yet for many wild organisms, age is an inaccessible trait. In many cases measuring age or ageing rates in the wild requires molecular biomarkers of age. Epigenetic clocks based on DNA methylation have been shown to accurately estimate the age of humans and laboratory mice, but they also show variable ticking rates that are associated with mortality risk above and beyond that predicted by chronological age. Thus, epigenetic clocks are proving to be useful markers of both chronological and biological age, and they are beginning to be applied to wild mammals and birds. We have acquired strong evidence that an accurate clock will be possible for the wood mouse <i>Apodemus sylvaticus </i>by adapting epigenetic information from the laboratory mouse. <i>Apodemus sylvaticus is</i> a well-studied field system that is amenable to experimental perturbations and longitudinal sampling of individuals across their lives, and these features of the wood mouse offer opportunities to disentangle causal relationships between ageing rates and environmental stress. Our wood mouse epigenetic clock is PCR-based, and so requires tiny amounts of tissue and non-destructive sampling. We quantified methylation using Oxford Nanopore sequencing technology and present a new bioinformatics pipeline for data analysis. We thus describe a new and generalizable system that should enable ecologists and other field biologists to go from tiny tissue samples to an epigenetic clock for their study animal. </span></p>
Anti Cancer Peptide and non-Anti Cancer Peptide data set.
<p>Anticancer and non-anticancer peptide data set. </p>
University of Denver Collections as Data - HTR Train and Validation Set JCRS_2020_5_27
<p><a href="https://zenodo.org/api/files/333ecb88-1f48-4ffd-b39e-5e70b800c276/HTR_Train_Set_JCRS_2020_5_27.zip">HTR_Train_Set_JCRS_2020_5_27.zip</a> <br> Description</p>
Data set for "Logic-in-Memory Based on an Atomically Thin Semiconductor"
<p>Curves related to device characteristics from the paper "Logic-in-Memory Based on an Atomically Thin Semiconductor", Nature 2020, doi:10.1038/s41586-020-2861-0</p>
Dataset from Article "INGe: Intensity-ground motion data set for Italy"
<p><strong>There is a newer version of this record available at <a href="https://zenodo.org/record/4623732#.YMN8ofkzY2w">https://zenodo.org/record/4623732#.YMN8ofkzY2w</a>.</strong></p> <p>An updated and homogeneous earthquake data set for Italy compiled by joining the Italian Macroseismic Database DBMI15 and the Engineering Strong-Motion (ESM) accelerometric data bank. The database has been compiled through an extensive procedure of selection and revision based on two main steps: 1) the removal of several earthquakes in DBMI15 because the data source has been considered to be largely unreliable and 2) the extraction of all the localities reporting intensity data which are located within 3 km from the accelerograph stations that recorded the data.</p> <p><br> The final data set includes 323 recordings from 65 earthquakes and 227 stations in the time span 1972-2016. The events are characterized by magnitudes in the range 4.0-6.9 and depths in the range 0.3-45.0 km.</p> <p><br> Here, we illustrate the data collection and the properties of the database in terms of recording, event and station distributions as well as Mercalli-Cancani-Sieberg (MCS) macroseismic intensity points. Furthermore, we list the most relevant features of engineering interest showing several statistics with reference to the most significant metadata (such as moment magnitude, several distance metrics, style of faulting etc).</p> <p> </p>
Data sets for compound promiscuity analysis and predictions
<p>Deposited are three data sets containing compounds with multi- or single-target activity, which were assembled from the PubChem BioAssay database for promiscuity predictions [1]. The design and composition of these data sets are described in the original publication [1] and a forthcoming data note detailing the deposition. A brief summary of the data structure is provided in the readme.txt file accompanying the data sets.</p>
Data Set "Systematic partitioning of proteins for quantum-chemical fragmentation methods using graph algorithms"
<p>Data set accompanying the publication "Systematic partitioning of proteins for quantum-chemical fragmentation methods using graph algorithms"</p> <p>The data set contains:</p> <p>- Input script for PyADF (v0.97) for calculating (a) all two body terms to use as graph weights and (b) fragmentation error for all k and nmax (aspf)</p> <p>- PDB files of proteins and the "regions of interest" (RoI) used in this work.</p> <p>- Raw data: protein graph representations, resulting partitions, data underlying all figures shown in our article.</p> <p>- Jupiter notebook to create all figures shown in the article and in the supporting information from data in the results folder.</p> <p>- Images of protein structures and graph representations of ubiquitin.</p>
HSV-2/HIV-1 primer sets, extended data, and their associated raw data
<p>Herpes simplex viruses (HSVs) are highly pervasive and show a strong synergistic interaction with human immunodeficiency virus (HIV). 44 convenience samples were screened for HSV and HIV-1 using the highly sensitive enzyme-linked immunosorbent assay (ELISA). Of 44 samples, 81.8% were positive for HIV-1, while 79.5% were positive for HSV when screened with ELISA kits. The results of PCR with type specific primers showed that 11.4% samples were specific for HSV-1 while 85.7% were specific for HSV-2. Pearson's chi-squared test established that there is a significant relationship between HSV-2 and HIV-1 transmission specific for HSV-1 while 85.7% were specific for HSV-2. Pearson's chi-squared test established that there is a significant relationship between HSV-2 and HIV-1 transmission.</p>
Orius data set
<p>Data set of Orius</p> <p>Choice experiment</p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.