Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

8,071

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

8,071 results for “transcriptome analysis”

Learn how ShareScore rates datasets ↗
geo24/100

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Sdhaf4-/- Cardiac Transcriptomes

GEO Series GSE163809. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2022View details →
geo24/100

Transcriptomic and Network Analysis of Minor Salivary Glands of Patients with Sjögren’s Syndrome

GEO Series GSE157159. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2021View details →
geo24/100

Transcriptome analysis of Streptococcus mutans biofilms in response to cranberry proanthocyanidins

GEO Series GSE40172. Streptococcus mutans UA159. 8 samples. Type: Expression profiling by array.

openGEO-OpenAug 2012View details →
geo24/100

Integrated analysis of genomic and epigenomic regulation of transcriptome identifies molecular subtypes of liver cancer (gene expression)

GEO Series GSE87630. Homo sapiens. 94 samples. Type: Expression profiling by array.

openGEO-OpenOct 2017View details →
geo24/100

Transcriptome analysis of the pfkB1 deletion mutant cultivated with glucose or fructose

GEO Series GSE83383. Corynebacterium glutamicum R. 8 samples. Type: Expression profiling by array.

openGEO-OpenNov 2016View details →
geo24/100

Fluidigm C1 + Illumina HiSeq quantitative whole transcriptome analysis of unsorted population of E16.5 lung cells

GEO Series GSE69761. Mus musculus. 148 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2015View details →
geo24/100

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Stat3f/f K5cre Skin Transcriptomes

GEO Series GSE86071. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2016View details →
geo24/100

A transcriptome analysis of a citrus rootstock Poncirus trifoliata identified genes associated with arbuscular mycorrhizal symbiosis

GEO Series GSE77455. Citrus trifoliata. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2018View details →
geo24/100

Next Generation Sequencing Quantitative Analysis of steroid receptor RNA activator (SRA1) Transcriptomes

GEO Series GSE74461. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2015View details →
geo24/100

Whole transcriptome analysis for kidney aging in mice [miRNA-seq]

GEO Series GSE154222. Mus musculus. 15 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenJul 2020View details →
geo24/100

Transcriptome-wide analysis of the RNA content of purified Nanoblades

GEO Series GSE107035. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenDec 2017View details →
geo24/100

Transcriptome analysis of quiescent livers and regenerating livers after partial hepatectomy (PH) in young and aged mice

GEO Series GSE282210. Mus musculus. 133 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2025View details →
geo24/100

Next Generation Sequencing Facilitates Quantitative Analysis of primary cultured astrocytes Transcriptomes from neonatal wild type and Spp1 KO retina and optic nerve.

GEO Series GSE174522. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2022View details →
geo24/100

Genome-wide transcriptome analysis of Fusarium fujikuroi Δset2 and Δash1 mutants

GEO Series GSE90947. Fusarium fujikuroi. 12 samples. Type: Expression profiling by array.

openGEO-OpenNov 2017View details →
geo24/100

High Throghput sequencing analysis of NVEGF and NLS-NVEGF with and without Dox treatment Transcriptomes

GEO Series GSE178297. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2021View details →
geo24/100

Transcriptome analysis of MDBK cells infected with cytopathic bovine viral diarrhea virus (BVDV)

GEO Series GSE166288. Bos taurus. 8 samples. Type: Expression profiling by array.

openGEO-OpenFeb 2021View details →
geo24/100

Transcriptomic, (phospho)proteomic, and metabolomic analysis of tumor-comprising cells treated by photodynamic therapy [mouse]

GEO Series GSE84757. Mus musculus. 12 samples. Type: Expression profiling by array.

openGEO-OpenNov 2016View details →
geo24/100

RNA-seq analysis of emf1, lhp1, ebs shl and ebs shl lhp1 transcriptomes in Arabidopsis thaliana

GEO Series GSE104370. Arabidopsis thaliana. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2018View details →
geo24/100

Transcriptome analysis of tendon derived from Piezo1 mutant mice

GEO Series GSE169261. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2021View details →
geo24/100

Single-cell transcriptomic analysis of human germinal center B cells

GEO Series GSE139891. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2020View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record