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Dataset results
256 results for “Aedes aegypti”
Aedes aegypti strain:LVP_AGWG (yellow fever mosquito)
GEO Series GSE113256. Aedes aegypti. 3 samples. Type: Other.
Single-cell atlases of Aedes aegypti midgut and fat body reveal cellular and metabolic dynamics after a blood-meal
GEO Series GSE281673. Aedes aegypti. 4 samples. Type: Expression profiling by high throughput sequencing.
De novo assembly of Aedes aegypti using Hi-C yields chromosome-length scaffolds
GEO Series GSE95797. Aedes aegypti; Culex quinquefasciatus; Homo sapiens. 3 samples. Type: Other; Third-party reanalysis.
Induction of a peptide with activity against a broad spectrum of pathogens in the Aedes aegypti salivary gland, following infection with dengue virus
GEO Series GSE21528. Aedes aegypti. 2 samples. Type: Expression profiling by SAGE.
Investigating the factors that regulate dengue virus infection in Aedes aegypti female mosquitoes with Aedes aegypti transcriptomic analysis
GEO Series GSE222893. Aedes aegypti. 18 samples. Type: Expression profiling by high throughput sequencing.
The transcriptome of Aedes aegypti females from two strains (Chetumal and Rex-D Puerto Rico) either kept on a sugar diet or blood fed
GEO Series GSE32074. Aedes aegypti. 8 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive DNA methylation analysis of the Aedes aegypti genome
GEO Series GSE82063. Aedes aegypti. 1 samples. Type: Methylation profiling by high throughput sequencing.
Aedes aegypti embryos
GEO Series GSE34480. Aedes aegypti. 4 samples. Type: Expression profiling by high throughput sequencing.
Understanding the role of microRNAs in the interaction of Aedes aegypti mosquitoes with an insect-specific flavivirus
GEO Series GSE100917. Aedes aegypti. 36 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Tissue-enriched expression profiles in Aedes aegypti identify hemocyte-specific transcriptome responses to infection
GEO Series GSE38744. Aedes aegypti. 40 samples. Type: Expression profiling by array.
A Vago-like gene enhances dengue and Zika virus dissemination in Aedes aegypti
GEO Series GSE269945. Aedes aegypti. 72 samples. Type: Expression profiling by high throughput sequencing.
A database of circadian and diel rhythmic gene expression in the yellow fever mosquito Aedes aegypti
GEO Series GSE60496. Aedes aegypti. 24 samples. Type: Expression profiling by array.
Small RNA genomics of Aedes aegypti mosquitoes discovers infectious viruses that trigger an RNA interference response [RNA-seq]
GEO Series GSE309876. Aedes aegypti; Aedes albopictus. 95 samples. Type: Expression profiling by high throughput sequencing.
Effect of Wolbachia (wMel strain) on gene expression in Dirofilaria immitis infected-Aedes aegypti
GEO Series GSE268280. Aedes aegypti. 4 samples. Type: Expression profiling by high throughput sequencing.
Genomic adaptations of Aedes aegypti in Brazil
<p>This Zenodo repository accompanies our manuscript on the genetic diversity and adaptations of Aedes aegypti mosquitoes in Brazil. The repository includes the complete R project, raw genotype call data, genotype calls, results, code, and all related findings. Our study aims to clarify the global population structure and genetic differentiation of <em>Ae. aegypti</em>, focusing on the unique ecological environments in Brazil. By genotyping 50k SNPs across 1,330 samples, we conducted comprehensive ancestry analyses, population structure evaluations, and genetic differentiation assessments. The selection scans and gene-environment association analyses revealed significant genetic diversity and local adaptation, identifying eight genetic clusters in Brazil. These clusters likely result from environmental pressures and reintroductions post-eradication efforts. Our findings emphasize the importance of considering local adaptation in vector control strategies.</p>
Use of genetics in monitoring control measures for Aedes aegypti and Aedes albopictus
<p>This study evaluated the impact of long-term pyriproxyfen exposure on the genetic structure and diversity of Ae. aegypti and Ae. albopictus mosquito populations. The study was conducted in Manaus, Amazonas, Brazil, where pyriproxyfen dissemination stations have been monitored since 2014 up to the present day. Double digest restriction-site associated DNA sequencing (ddRADSeq) was performed. Sequencing quality control was applied with mean quality filtering, trimming, minimum length filtering and adapter removal procedures using Trimmomatic. All sequencing reads were aligned with BWA program to the reference genome of Ae. aegypti (NC_035159.1) and Ae. albopictus (JAFDOQ000000000.1). Variant calling was performed using Stacks v2.62, with gstacks approach. The variant panel was exported in the VCF v4.2 format. SNPs were removed from the variant panel based on a minimum allele frequency (MAF) < 0.1 and at least 8 non-missing genotypes within each group.</p>
Differential gene expression of meiotic drive system of Aedes aegypti
GEO Series GSE43562. Aedes aegypti. 6 samples. Type: Expression profiling by array.
MicroRNAs and other small RNAs in Aedes aegypti saliva and salivary glands following chikungunya virus infection
GEO Series GSE174512. Aedes aegypti. 12 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Dengue virus inhibits immune responses in Aedes aegypti cells
GEO Series GSE33274. Aedes aegypti. 6 samples. Type: Expression profiling by array.
Small RNA and AGO1 CLIP-seq libraries of female Aedes aegypti fat body
GEO Series GSE93345. Aedes aegypti. 7 samples. Type: Non-coding RNA profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.