Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
390
datasets available to search
ShareScore release 0.7.1
Dataset results
390 results for “Commensals”
In vivo commensal control of Clostridioides difficile virulence
GEO Series GSE182613. Mus musculus. 46 samples. Type: Expression profiling by high throughput sequencing.
Drosophila and Commensal Bacteria Synergistically Compete with Opportunistic Pathogens at Bulk and Single-Cell Resolutions [scRNA-seq]
GEO Series GSE251782. Serratia marcescens; Lactiplantibacillus plantarum. 6 samples. Type: Expression profiling by high throughput sequencing.
The ubiquitous human skin commensal Staphylococcus hominis protects against opportunistic pathogens
GEO Series GSE199818. Staphylococcus hominis. 6 samples. Type: Expression profiling by high throughput sequencing.
Intestinal inflammation promotes gut commensal-specific CD4 T cell to initiate molecular mimicry-mediated neuroinflammation
GEO Series GSE295689. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Interspecies commensal interactions have nonlinear impacts on host immunity
GEO Series GSE179165. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Mast cell tolerance in the skin microenvironment to commensal bacteria is controlled by fibroblasts [triplicates]
GEO Series GSE223179. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Innate type 2 immunity controls hair follicle commensalism by Demodex mites [2021]
GEO Series GSE197982. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Selection of cross-reactive T cells by commensal and food-derived yeasts drives pathogenic cytotoxic Th1 responses in Crohn´s disease
GEO Series GSE227638. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing; Other.
Bacterial nucleoside catabolism controls quorum sensing and commensal-to-pathogen transition in the Drosophila gut
GEO Series GSE140194. Pectobacterium carotovorum. 2 samples. Type: Expression profiling by high throughput sequencing.
Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [Spatial Transcriptome seq]
GEO Series GSE252176. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
The commensal bacterium Lactiplantibacillus plantarum imprints innate memory-like responses in mononuclear phagocytes
GEO Series GSE159496. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Commensal bacteria and the lung environment are responsible for Th2-mediated memory yielding natural IgE in MyD88-deficient mice
GEO Series GSE220657. Mus musculus. 54 samples. Type: Expression profiling by high throughput sequencing; Other.
Transcriptomic response of immune signaling pathways in intestinal epithelial cells exposed to commensals, pathogens and probiotics
GEO Series GSE31394. Homo sapiens. 12 samples. Type: Expression profiling by array.
Peptide YY: a Paneth cell antimicrobial peptide that maintains Candida gut commensalism.
GEO Series GSE229566. Candida albicans. 12 samples. Type: Expression profiling by high throughput sequencing.
Therapy of allergic rhinitis using ribavirin spray to clear nasal commensal viruses
GEO Series GSE266238. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
GEO Series GSE156425. Arabidopsis thaliana. 100 samples. Type: Expression profiling by high throughput sequencing.
Commensal Microbiota Promote Lung Tumorigenesis via γδ T Cells
GEO Series GSE114340. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [scRNA-seq]
GEO Series GSE252175. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Periportal macrophages protect against commensal-driven liver inflammation [spatial transcriptomics]
GEO Series GSE213388. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Clec12a controls colitis by tempering inflammation and restricting expansion of specific commensals
GEO Series GSE283366. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.