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452 results for “Mitogenomics”
FIGURE 9 in Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
FIGURE 9. Pupa of M. javanus. A–C Mature pupa, female (A ventral view; B dorsal view; C lateral view). D–F Pupa of early stages, sex undetermined (D ventral view; E head; F pronotum) (Scale bar: A–D: 5 mm; E, F: 1 mm).
FIGURE 10 in Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
FIGURE 10. Mature larva of M. javanus. A Habitus (lateral view). B–D Head and thorax (B lateral view; C dorsal view; D ventral view). E Head. F Left V spiracle (unmarked arrows represent fleshy tubercles, scale bar: A, B–D: 5 mm; E–F: 2 mm).
FIGURE 8. Male genitalia. A–C Tergite IX, IX in Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
FIGURE 8. Male genitalia. A–C Tergite IX, IX (T9, T10) and sternite IX (S9) of male adult (A left view; B ventral view; C dorsal view). D–G Aedeagus (D dorsal view; E ventral view; F left view; G right view). H Median lobe (left view). I Aedeagus, separated (left on dorsal view) J–M Phallobase and parameres (J dorsal view; K ventral view; L left view; M right view) (Scale bar: A–G, H–M, 1 mm).
FIGURE 6 in Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
FIGURE 6. Adult morphology of M. javanus. A–C Male habitus (A dorsal view; B ventral view; C lateral view). D–F Female habitus (D dorsal view; E ventral view; F lateral view) (Scale bar: 5 mm).
FIGURE 4 in Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
FIGURE 4. Phylogenetic trees of M. javanus (Nujiang) and 16 Tenebrionoidea species based on 13 mitochondrial PCGs and two rRNA genes. Inferred phylogenetic relationships among Tenebrionoidea based on nucleotide sequences of concatenated set of 13 PCGs and two rRNAs (rrnL and rrnS) using BI and ML analyses. Batocera lineolata and Massicus raddei were used as outgroups. Topology came from BI analysis, with numbers on each branch indicating Bayesian posterior probabilities (BBP)/ ML bootstrap values.
FIGURE 3 in Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
FIGURE 3. AT and GC skew (A) and relative synonymous codon usage (RSCU) (B) of 13 PCGs of M. javanus mitogenome. All PCGs have negative AT skew values and most PCGs also have negative GC values. RSCU of M. javanus indicates a strong bias toward A + T-rich codons.
FIGURE 2 in Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
FIGURE 2. Secondary structure of 22 tRNAs in mitogenome of M. javanus. All 22 tRNAs show typical cloverleaf structures, except trnS1.
FIGURE 7 in Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
FIGURE 7. Pronotum of M. javanus adults. A–B Type-I (typical) color pattern (Lincang). C–D Type-II color pattern (Nujiang). E–F Type-III color pattern (E: Lincang; F: Chuxiong). G Type-IV color pattern (Lincang). H Type-V color pattern (Lincang). (A, C, E, and H, male; B, D, F, and G, female; Scale bar: 1 mm).
FIGURE 1 in Complete mitogenome and phylogenetic significance of Metoecus javanus (Pic, 1913) (Coleoptera: Ripiphoridae) from Southwest China, with notes on morphological traits of adult and immature stages
FIGURE 1. Complete mitochondrial genome organization of M. javanus. Genes inside the circle are on the J-strand (majority strand) and those outside the circle are on the N-strand (minority strand).
Supplementary material 5 from: Sullivan JP, Hopkins CD, Pirro S, Peterson R, Chakona A, Mutizwa TI, Mukweze Mulelenu C, Alqahtani FH, Vreven E, Dillman CB (2022) Mitogenome recovered from a 19 th Century holotype by shotgun sequencing supplies a generic name for an orphaned clade of African weakly electric fishes (Osteoglossomorpha, Mormyridae). ZooKeys 1129: 163-196. https://doi.org/10.3897/zookeys.1129.90287
Measurements and counts of Heteromormyrus specimens and relevant mormyrid types from existing literature and taken from photographs & radiographs of newly sequenced individuals
FIGURE 6 in Complete mitogenome of Calliptamus barbarus Costa (Orthoptera: Acrididae) and its phylogeny in Acridoidea
FIGURE 6. Sliding window analyses of alignment among the four Calliptaminae species. The black curve shows the value of nucleotide diversity (Pi). 13 PCGs are represented by 4 different colored boxes.
FIGURE 4 in Complete mitogenome of Calliptamus barbarus Costa (Orthoptera: Acrididae) and its phylogeny in Acridoidea
FIGURE 4. Alignment of overlapping regions of two groups of adjacent PCGs (ATP8 and ATP6; ND4L and ND4) in mitogenomes of C. barbarus and other 10 grasshoppers.
FIGURE 1 in Complete mitogenome of Calliptamus barbarus Costa (Orthoptera: Acrididae) and its phylogeny in Acridoidea
FIGURE 1. Circular map of the annotated mitogenome of C. barbarus. Protein coding and ribosomal genes are shown with standard abbreviations. Transfer RNA (tRNA) genes are indicated using the IUPAC-IUB single letter amino acid codes.
FIGURE 7 in Complete mitogenome of Calliptamus barbarus Costa (Orthoptera: Acrididae) and its phylogeny in Acridoidea
FIGURE 7. The overall Ka/Ks ratios calculated by using the DnaSP 6.0 for 13 PCGs in Calliptaminae. Jukes and Cantor-corrected Evolutionary rate.
FIGURE 2 in New Tullbergiidae mitogenomes as the evidence of sister relationship with Onychiuridae (Hexapoda, Collembola)
FIGURE 2. Phylogenetic placement of Metaphorura motuoensis, Mesaphorura yosii, and Paratullbergia changfengensis (in bold) based on Bayesian and maximum likelihood inference, amino acid sequences. Numbers in the nodes are the posterior probability and bootstrap values, respectively.
FIGURE 1 in New Tullbergiidae mitogenomes as the evidence of sister relationship with Onychiuridae (Hexapoda, Collembola)
FIGURE 1. Circular representation of the mitogenomes of Metaphorura motuoensis, Mesaphorura yosii, and Paratullbergia changfengensis, respectively from top to bottom. The innermost circle shows the GC content and the outermost circle shows the gene features, rRNAs, tRNAs, and PCGs. Plus (+) indicates the side of the major J-strand.
Supplementary material 4 from: Sun T, Zou W, Dong Q, Huang O, Tang D, Yu H (2022) Morphology, phylogeny, mitogenomics and metagenomics reveal a new entomopathogenic fungus Ophiocordyceps nujiangensis (Hypocreales, Ophiocordycipitaceae) from Southwestern China. MycoKeys 94: 91-108. https://doi.org/10.3897/mycokeys.94.89425
Phylogenetic analyses of the ranked top 50 families identified from Ophiocordyceps nujiangensis based on maximum likelihood (ML). Values at the nodes are ML bootstrap proportions
Supplementary material 3 from: Sun T, Zou W, Dong Q, Huang O, Tang D, Yu H (2022) Morphology, phylogeny, mitogenomics and metagenomics reveal a new entomopathogenic fungus Ophiocordyceps nujiangensis (Hypocreales, Ophiocordycipitaceae) from Southwestern China. MycoKeys 94: 91-108. https://doi.org/10.3897/mycokeys.94.89425
Rarefaction curves (Shannon-Wiener curve) of the fungal communities collected from the fruiting body from four different specimens of Ophiocordyceps nujiangensis
Supplementary material 2 from: Sun T, Zou W, Dong Q, Huang O, Tang D, Yu H (2022) Morphology, phylogeny, mitogenomics and metagenomics reveal a new entomopathogenic fungus Ophiocordyceps nujiangensis (Hypocreales, Ophiocordycipitaceae) from Southwestern China. MycoKeys 94: 91-108. https://doi.org/10.3897/mycokeys.94.89425
The information of species and their mitochondrial genomes for constructing the mitochondrial-genome phylogenetic tree of Hypocreales
FIGURE 12 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 12. Ultragryllacris pulchra rubricapitis Bin & Bian, 2021. A. habitus in lateral view; B–E. tegmina in dorsal view: B, D. left tegmen, C, E. right tegmen; A–C. male; D–E. female.
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Allen Brain Atlas
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International Brain Laboratory public data
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OpenNeuro
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