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3,878 results for “Molecular data”
Fig. 3 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)
Fig. 3. Maximum likelihood analysis of sequences of nuclear DNA loci (28S rDNA (A) and 18S rDNA (B)) of Dicrocoeliidae. Bootstrap values (n = 1000) are indicated for nodal support. Black circles indicate new sequences. The scale-bars indicate the number of substitutions per nucleotide site.
Fig. 2 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)
Fig. 2. Maximum likelihood analysis of sequences of the ND1 DNA locus of Dicrocoeliidae. Bootstrap values (n = 1000) are indicated for nodal support. Black circles indicate new sequences. The scale-bar indicates the number of substitutions per nucleotide site.
Fig. 9 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)
Fig. 9. Representative photographs of slides with Lyperosomum petiolatum. Host species, sampling dates and host identification numbers are indicated. All specimens originated from the Czech Republic.
Fig. 7 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)
Fig. 7. Representative photographs of slides with Lyperosomum tenori sp. n. (upper part of the figure) and Lyperosomum hirundinis sp. n. (lower part of the figure). Host species, sampling dates and host identification numbers are indicated. All specimens originated from the Czech Republic. Photographs of L. hirundinis sp. n. are composite photographs merged from multiple images. Note that the seeming differences in forebody shape of L. tenori sp. n. individuals is caused by differences in handling with host birds prior the fixation of the trematodes - L. tenori sp. n. from hosts that were frozen prior the examination are highly susceptible to forebody prolongation.
Fig. 11 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)
Fig. 11. Representative photographs of slides with Stromitrema acrocephali sp. n. and Lutztrema atricapillae. Host species, sampling dates and host identification numbers are indicated. All specimens originated from the Czech Republic.
Fig. 6 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)
Fig. 6. Drawings of holotype specimens of Lyperosomum tenori sp. n. (A), Lyperosomum atricapillae sp. n. (B), Stromitrema acrocephali sp. n. (C), Lutztrema atricapillae sp. n. (D), and Lyperosomum hirundinis sp. n. (E–F).
Fig. 8 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)
Fig. 8. Representative photographs of slides with Lyperosomum atricapillae sp. n. Host species, sampling dates and host identification numbers are indicated. All specimens originated from the Czech Republic.
Fig. 11. Plectanocotyle jeanloujustinei n in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 11. Plectanocotyle jeanloujustinei n. sp. ex Chelidonichthys lastoviza from the western Mediterranean. Detail of the reproductive organs in the region of ovary, ventral view (HEL 1715).
Fig. 10. Plectanocotyle jeanloujustinei n in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 10. Plectanocotyle jeanloujustinei n. sp. ex Chelidonichthys lastoviza from the western Mediterranean. Disposition of clamps sclerites. A, Dorsal jaw. B, Ventral jaw. C, Clamp, dorsal view (HEL 1713).
Fig. 9. Plectanocotyle jeanloujustinei n in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 9. Plectanocotyle jeanloujustinei n. sp. ex Chelidonichthys lastoviza from the western Mediterranean. A, Body, holotype, ventral view (HEL 1721). B, Clamp, hologenophore, ventral view (HEL 1731). C, Clamp, paratype, dorsal view (HEL 1717). D, terminal lappet, paratype (HEL 1717). E, Anterior end showing male copulatory organ, paratype, ventral view (HEL 1720). F, Egg, paratype (HEL 1714).
Fig. 4 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 4. Tree inferred using the ML method based on the cox1 sequence data; only bootstrap values higher than 70 are indicated. The newly generated sequences of Plectanocotyle gurnardi sensu stricto are indicated in blue. (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)
Fig. 8 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 8. Plectanocotyle gurnardi (Van Beneden and Hesse, 1863) sensu stricto ex Eutrigla gurnardus from the North Sea, Sweden, Detail of the reproductive organs in the region of ovary, ventral view (SMNH 216584).
Fig. 5 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 5. Tree inferred using the ML method based on the 28S rDNA sequence data; only bootstrap values higher than 70 are indicated. The newly generated sequences are indicated in bold. All sequences of Plectanocotyle gurnardi from the type-host Eutrigla gurnardus clustered in a single clade. * The polyopisthocotylean parasite annotated on GenBank as "Plectanocotyloides obscurum"; the host as "Aspitrigla obscura".
Fig. 3. Plectanocotyle jeanloujustinei n in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 3. Plectanocotyle jeanloujustinei n. sp. ex Chelidonichthys lastoviza from the western Mediterranean (Algeria), hologenophores. A-E, Body lacking only the haptor. F. Body lacking a lateral part posterior part. G-H, anterior end of the body including the male copulatory organ. The missing parts were excised and used for DNA extraction. A, (HEL1729). B, (HEL1730). C, (HEL1732). D, (HEL1733). E, (HEL1734). F, (HEL1731). G, (HEL1727). H, (HEL17287).
Fig. 2 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 2. Plectanocotyle gurnardi (Van Beneden and Hesse, 1863) sensu stricto ex Eutrigla gurnardus from the North Sea, Sweden, hologenophores, body lacking only a lateral part; excised used for DNA extraction A, (SMNH 216644). B, (SMNH 216645). C, (SMNH 216646).
Fig. 1 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 1. One of the unstudied specimens of Plectanocotyle gurnardi (Van Beneden and Hesse, 1863) from the type-host Eutrigla gurnardus available for study before this paper, and that hinted the presence of Plectanocotyle gurnardi in Swedish waters of the North Sea. The slide containing two specimens of Plectanocotyle gurnardi labeled as "Phyllocotyle gurnardi": unstudied specimens collected by Theodor Odhner from the gills of Eutrigla gurnardus from Kristineberg, Sweden, Northeast Atlantic.
Fig. 6 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 6. Plectanocotyle gurnardi (Van Beneden and Hesse, 1863) sensu stricto ex Eutrigla gurnardus from the North Sea, Sweden. A, Body, ventral view (SMNH 216639). B, Clamp, ventral view (SMNH 216593). C, Anterior end showing male copulatory organ, ventral view (SMNH 216586). D, Egg, (SMNH 216594).
Fig. 7 in "Something old, something new, something borrowed, and the oioxeny is true": description of Plectanocotyle jeanloujustinei n. sp. (Polyopisthocotylea, Plectanocotylidae) from the MNHN Helminthology collection with novel molecular and morphological data for P. gurnardi (Van Beneden & Hesse, 1863) (sensu stricto) from Sweden
Fig. 7. Plectanocotyle gurnardi (Van Beneden and Hesse, 1863) sensu stricto ex Eutrigla gurnardus from the North Sea, Sweden, disposition of clamps sclerites. A, Dorsal jaw. B, Ventral jaw. C, Clamp, ventral view (SMNH 216593). 3.2. Morphology
Source Data for the paper: "Quantum-classical simulations reveal the photoisomerization mechanism of a prototypical first-generation molecular motor"
<p>This dataset contains the raw data for the results shown in the paper.</p> <p>For each figure of the paper (main text), one directory with data file(s) is provided.</p>
Neural-network-based molecular dynamics simulations reveal that proton transport in water is doubly gated by sequential hydrogen-bond exchange: Neural network potentials training data
<h1>Neural network potentials of an excess proton in bulk water, training data</h1> <p>This dataset contains 2188 configurations labeled at two hybrid DFT levels (revPBE0-D3 and B3LYP-D3).</p> <p>The configurations are given as a single XYZ file: configurations.xyz</p> <p>The box dimensions are written in box.txt</p> <p>The energies for all configurations at a given level of theory are written in energies_LEVEL.txt (one configuration per line)</p> <p>The atomic forces for each configuration at a given level of theory are gathered in a XYZ file: forces_LEVEL.xyz</p> <p>The relative displacements of the Wannier centroids, with respect to the closest oxygen atom, for each configuration at a given level of theory, are in the following XYZ file: wannier-centroids-displacements_LEVEL.xyz</p>
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Allen Brain Atlas
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.