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FIGURE 7 in Hidden in plain sight: reassessment of the pig-footed bandicoot, Chaeropus ecaudatus (Peramelemorphia, Chaeropodidae), with a description of a new species from central australia, and use of the fossil record to trace its past distribution
FIGURE 7. Upper and lower dentition of Chaeropus ecaudatus occidentalis. a), d), NHMUK ZD 1844.7.9.22, holotype, adult female; b), QM JM 770, adult subfossil; c), e), WAM 71.5.1, adult subfossil. a)–c), upper dentition in occlusal view; d)–e), lower dentition in occlusal view. Scale = 2mm.
FIGURE 16 in Hidden in plain sight: reassessment of the pig-footed bandicoot, Chaeropus ecaudatus (Peramelemorphia, Chaeropodidae), with a description of a new species from central australia, and use of the fossil record to trace its past distribution
FIGURE 16. Dated phylogenetic analysis of Chaeropus using the molecular data under a Birth-Death model. In the background on grey we present the analysis under a Yule process of speciation.
FIGURE 2 in Arthropod Succession On Pig Carcasses In Southeastern Nigeria
FIGURE 2: Succession pattern of the breeding arthropods on decomposing pig carcasses in Akwa Ibom, Nigeria. E = eggs, L = larval instars and pupae, A = adults.
FIGURE 3 in Arthropod Succession On Pig Carcasses In Southeastern Nigeria
FIGURE 3: Succession pattern of the non-breeding arthropods on decomposing pig carcasses to under shade and out of shade in Akwa Ibom, Nigeria. ◄ species taken only from carcasses out shade, ♦ species taken only from carcasses under shade.
Pilot scale on-site demonstration and seasonality assessment of nitrogen recovery and water reclamation from pig's slurry liquid fraction
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Data from: Interpreting and predicting the spread of invasive wild pigs
The eruption of invasive wild pigs (IWPs) Sus scrofa throughout the world exemplifies the need to understand the influences of exotic and non-native species expansions. In particular, the continental USA is precariously threatened by a rapid expansion of IWPs, and a better understanding of the rate and process of spread can inform strategies that will limit the expansion. We developed a spatially and temporally dynamic model to examine three decades (1982–2012) of IWP expansion, and predict the spread of IWPs throughout the continental USA, relative to where IWPs previously inhabited. We used the model to predict where IWPs are likely to invade next. The average rate of northward expansion increased from 6.5 to 12.6 km per year, suggesting most counties in the continental USA could be inhabited within the next 3–5 decades. The spread of IWPs was primarily associated with expansion into areas with similar environmental characteristics as their previous range, with the exception of spreading into colder regions. We identified that climate change may assist spread into northern regions by generating milder winters with less snow. Otherwise, the spread of IWPs was not dependent on agriculture, precipitation, or biodiversity at the county level. The model correctly predicted 86% of counties that were invaded during 2012, and those predictions indicate that large portions of the USA are in immediate danger of invasion. Synthesis and applications. Anti-invasion efforts should focus along the boundaries of current occupied range to stop natural expansion, and anti-invasion policies should focus on stopping anthropogenic transport and release of invasive wild pigs (IWPs). Our results demonstrate the utility of a spatio-temporal examination to inform strategies for limiting the spread of IWPs.
Data from: Genetic diversity, linkage disequilibrium and selection signatures in Chinese and Western pigs revealed by genome-wide SNP markers
To investigate population structure, linkage disequilibrium (LD) pattern and selection signature at the genome level in Chinese and Western pigs, we genotyped 304 unrelated animals from 18 diverse populations using porcine 60 K SNP chips. We confirmed the divergent evolution between Chinese and Western pigs and showed distinct topological structures of the tested populations. We acquired the evidence for the introgression of Western pigs into two Chinese pig breeds. Analysis of runs of homozygosity revealed that historical inbreeding reduced genetic variability in several Chinese breeds. We found that intrapopulation LD extents are roughly comparable between Chinese and Western pigs. However, interpopulation LD is much longer in Western pigs compared with Chinese pigs with average r20.3 values of 125 kb for Western pigs and only 10.5 kb for Chinese pigs. The finding indicates that higher-density markers are required to capture LD with causal variants in genome-wide association studies and genomic selection on Chinese pigs. Further, we looked across the genome to identify candidate loci under selection using FST outlier tests on two contrast samples: Tibetan pigs versus lowland pigs and belted pigs against non-belted pigs. Interestingly, we highlighted several genes including ADAMTS12, SIM1 and NOS1 that show signatures of natural selection in Tibetan pigs and are likely important for genetic adaptation to high altitude. Comparison of our findings with previous reports indicates that the underlying genetic basis for high-altitude adaptation in Tibetan pigs, Tibetan peoples and yaks is likely distinct from one another. Moreover, we identified the strongest signal of directional selection at the EDNRB loci in Chinese belted pigs, supporting EDNRB as a promising candidate gene for the white belt coat color in Chinese pigs. Altogether, our findings advance the understanding of the genome biology of Chinese and Western pigs.
Data of "Evaluation of feeding behaviour traits to predict efficiency traits in pigs using partial least square regression"
<p>This study explores the potential of using automatically recorded feeding behaviour as a proxy trait for protein and energy efficiency as well as fat gain in Swiss Large White pigs.</p> <p>behaviour.txt: A tab-delimited txt file of data used to investigate the relationship between feeding behaviour traits and protein efficiency in Swiss Large White pigs. Feeding behaviour traits taken were ‘daily feed intake’, ‘feeding rate’, ‘number of daily visits’, ‘duration at visits’, ‘feeding occupation’, and ‘feed intake per visit’.</p> <p>data_description_for_feeding_behaviour.xlsx: meta data for behaviour.txt with descriptions of variables</p>
New Deployable Expandable Electrodes in the Electroporation Treatment in a Pig Model: A Feasibility and Usability Preliminary Study.
<p>We uploaded a CT scan images of a pig pre and post irreversible electroporation treatment. The CT scan are acquired during animal pre clinical test of the study: Izzo F, Ionna F, Granata V, Albino V, Patrone R, Longo F, Guida A, Delrio P, Rega D, Scala D, Pezzuto R, Fusco R, Di Bernardo E, D'Alessio V, Grassi R, Contartese D, Palaia R. New Deployable Expandable Electrodes in the Electroporation Treatment in a Pig Model: A Feasibility and Usability Preliminary Study. Cancers (Basel). 2020 Feb 23;12(2):515. doi: 10.3390/cancers12020515. PMID: 32102182; PMCID: PMC7072261.</p>
Rooting out genetic structure of invasive wild pigs in Texas
<p>Invasive wild pigs (<i>Sus scrofa</i>), also called feral swine or wild hogs, are recognized as among the most destructive invasive species in the world. Throughout the United States, invasive wild pigs have expanded rapidly over the past 30 years with populations now established in 38 states. Of the estimated 6.9 million wild pigs distributed throughout the United States, Texas supports approximately 40% of the population and similarly bears disproportionate ecological and economic costs. Genetic analyses are an effective tool for understanding invasion pathways and tracking dispersal of invasive species such as wild pigs and have been used recently in California and Florida, USA, which have similarly long-established populations and high densities of wild pigs. Our goals were to use molecular approaches to elucidate invasion and migration processes shaping wild pig populations throughout Texas, compare our results with patterns of genetic structure observed in California and Florida, and provide insights for effective management of this invasive species. We used a high-density single nucleotide polymorphism (SNP) array to evaluate population genetic structure. Genetic clusters of wild pigs throughout Texas demonstrate 2 distinct patterns: weakly resolved, spatially dispersed clusters and well-resolved, spatially localized clusters. The disparity in patterns of genetic structure suggests disparate processes are differentially shaping wild pig populations in various localities throughout the state. Our results differed from the patterns of genetic structure observed in California and Florida, which were characterized by localized genetic clusters. These differences suggest distinct biological and perhaps anthropogenic processes are shaping genetic structure in Texas. Further, these disparities demonstrate the need for location-specific management strategies for controlling wild pig populations and mitigating associated ecological and economic costs.</p>
Visceral organ growth in pigs from birth through 150 kg bodyweight
<p>Visceral organs (VO) are essential for their role in the metabolism and distribution of consumed nutrients as well as other life functions in animals. Two experiments were conducted to assess the natural longitudinal changes that the VO undergo from birth through 150 kg body weight (BW). Results showed that both absolute and relative measurements (weight, volume, and length) of VO were dependent on the BW (age) of the pig.</p>
FMD_Pig
<p>Positive and negative images of face and mouth disease of pigs.</p>
Efficient colonic drug delivery in domestic pigs employing a tablet formulation with dual control concept
<p>Files contain LC-MS/MS data obtained from analysis of plasma and feces samples of 14 pigs (A-O). A description of the data can be found in the Word-file "Description of files".</p>
Hysterectomy: effects on the lungs of near full-term newborn pigs
<p>Supplementary Tables S1-S4 for the manuscript (Title: Hysterectomy: effects on the lungs of near full-term newborn pigs; corresponding author: Jing Sun ,email: sunjing85026@163.com)</p>
Guinea Pig Skin & Tick Bite Site - MSI Raw Data Files
<p>Ticks: nymphal <em>Ixodes scapularis</em>. Skin: Hartley Guinea Pigs. Raw MALDI-FTICR mass spectrometry imaging (MSI) data. File labeled "1" is negative ion mode. File labeled "2" is positive ion mode.</p>
Database for publication Costs and benefits of innovations able to reduce the use of Antimicrobials on Pig and Broiler Farms
<p>Database for publication Costs and Benefits of Innovations able to Reduce the Use of Antimicrobials on Pig and Broiler Farms HSOA Journal of Animal Research and Veterinary Science 2023 7:052</p>
The Soundwel Database: a labeled pig vocalization repository
<p>This repository contains extracted, individual pig calls labeled according to their context of production, collected as part of the project Soundwel (<a href="https://www.soundwel-project.eu/">https://www.soundwel-project.eu/</a>), and used in Briefer et al. 2022. It contains a total of 6888 calls produced by several hundred domestic pigs in 17 different context categories associated with negative or positive emotional valence. See Briefer et al. 2022 for details about the contexts and attributed emotional valence. The settings used to generate the spectrograms from the audio files are also included in the above publication.</p> <p>Please note that the slaughterhouse recordings used in Briefer et al. 2022 could not be included in the repository due to usage restrictions.</p>
EFECAB: Improving Pig Management to Prevent Epilepsy in Burkina Faso
ClinicalTrials.gov study NCT03095339. IPD Sharing: YES. Countries: 1. Publications: 8.
Effects of social structure and management on risk of disease establishment in wild pigs
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Data from: A splice mutation in the PHKG1 gene causes high glycogen content and low meat quality in pig skeletal muscle
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.