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257
datasets available to search
ShareScore release 0.9.0
Dataset results
257 results for “Proteomic analysis”
COMPARATIVE TRANSCRIPTOMIC AND PROTEOMIC ANALYSIS OF LGR5+ve STEM CELLS AND THEIR DAUGHTERS (AFFYMETRIX ARRAYS)
GEO Series GSE33948. Mus musculus. 6 samples. Type: Expression profiling by array.
Proteomics and Transcriptomics analysis of Arabidopsis Seedlings in Microgravity
On Earth plants are constantly exposed to a gravitational field of 1G. Gravity affects a plant in every step of its development. Germinating seedlings orient their radicle and hypocotyl and growing plants position organs at a specific Gravitropic Set-point Angle dictated by the asymmetric distribution of auxin depending on the gravity vector. Hence gravitropism is one of the fundamental growth responses in plants. For any experiment studying the effects of gravity on plants, the ultimate control is the microgravity in space. In this study, Arabidopsis seeds were flown to the International Space Station and allowed to germinate and grow for 3 days in microgravity. Arabidopsis Wild Type Col-0 seeds were plated onto twenty-two 60mm Petri plates, loaded into PDFUs and inserted 4 Biological Research in Canisters (BRICs). Approximately 800 seeds were sterilized, plated on each 60mm Petri plates and cold stratified for 16 hours followed by 2 hours of white light treatment. The BRICs were maintained at 4C until spaceflight to ensure seed germination in microgravity. After 3 days of germination and growth, the seedlings were fixed by injecting RNAlater into the chamber. They were kept at ambient temperature for 12 hours followed by freezing at -80C. An additional 22 plates were used as ground controls. After the spaceflight, tissue from five plates was pooled to make each of three replicates. Both membrane and soluble proteins were extracted from the pooled seedlings. Proteins were trypsin digested, labelled with iTRAQ and identified using tandem mass spectrometry.
Interleukin-18 induced chromatin accessibility coupled to proteomic analysis by mass cytometry and ion beam imaging
GEO Series GSE124297. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Deep sequencing and proteomics analysis reveal globally dysregulated expression of microRNA and their target genes in rat kidneys treated by carcinogenic dose of Aristolochic Acid
GEO Series GSE33703. Rattus norvegicus. 8 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Full transcriptome and proteome analysis of the mechanism of tuberculosis Ag85B-Fc2a in alleviating allergic asthma in mice
GEO Series GSE269136. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.
Paired transcriptomic and proteomic analysis implicates IL-1β in the pathogenesis of papulopustular rosacea explants [RNA-seq]
GEO Series GSE155141. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic and proteomic analysis of Trametes versicolor interacting with a Hypholoma fasciculare mycelium foraging in soil
GEO Series GSE245088. Trametes versicolor; Hypholoma fasciculare. 9 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic and proteomic multi-model global gene expression analysis reveals regulatory signatures during ischemia stroke (photothrombotic internal ischemia stroke)
GEO Series GSE134110. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome and proteome analysis revealed tyrosine oxidation involved in the periostracum formation of the green mussel Perna viridis (Linnaeus)
GEO Series GSE215890. Perna viridis. 2 samples. Type: Expression profiling by high throughput sequencing.
Integrated Transcriptomic-Proteomic Analysis Revealed the Diagnostic and Potential Therapeutic Targets of Colorectal Cancer
GEO Series GSE200076. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome and proteome analysis of resistant peanut pre-harvest seeds in response to Aspergillus flavus
GEO Series GSE102782. Arachis hypogaea. 6 samples. Type: Expression profiling by high throughput sequencing.
Proteomic and Transcriptomic Analysis of Neural Cell Fate in Developing Xenopus laevis Embryos and Explants
GEO Series GSE147621. Xenopus laevis. 42 samples. Type: Expression profiling by high throughput sequencing.
Whole proteome and transcriptome analysis of cancer-derived EVs overlap in specific pathways and distinct EV population
GEO Series GSE214804. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic and Proteomic Analysis of Saccharomyces cerevisiae with Secretion of Cellobiohydrolases
GEO Series GSE72413. Saccharomyces cerevisiae. 24 samples. Type: Expression profiling by array.
Integrated proteomic and transcriptomic analysis reveals wounding-responsive plant hormone signaling and primary metabolism contributing to the biosynthesis of secondary metabolites in harvested brocc
GEO Series GSE165229. Brassica oleracea var. italica. 1 samples. Type: Expression profiling by high throughput sequencing.
Comparative analysis of differential cellular genome and proteome regulation by HIV-1 and HIV-2 pseudovirions in the early phase of infection
GEO Series GSE246164. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic and proteomic analysis reveals the potential role of RBMS1 in adipogenesis and adipocyte metabolism
GEO Series GSE233256. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Integrated transcriptomic and proteomic analysis revealed the inhibition mechanism of a natural luvangetin from Zanthoxylum avicennae against Fusarium verticillioides
GEO Series GSE247362. Fusarium verticillioides. 6 samples. Type: Expression profiling by high throughput sequencing.
Integrated transcriptomic and proteomic analysis of the molecular cargo of extracellular vesicles derived from porcine adipose tissue-derived mesenchymal stromal/stem cells
GEO Series GSE87790. Sus scrofa. 12 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Integrated analysis of transcriptome and proteome of the human cornea and aqueous humor reveal novel biomarkers for corneal endothelial cell dysfunction
GEO Series GSE176481. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.