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Dataset results
307 results for “RAD”
Data from Radiometer (RAD) intercomparison measurements in Paris from 2022-09-02 to 2024-05-02 [RAW]
<p>Original logger data files from radiometer intercomparison measurements at SIRTA Atmospheric Observatory in Palaiseau in the Greater Paris region.</p>
Data from Radiometer (RAD) measurements at Paris – Chemin Vert Bobigny (PACHEM) from 2023-06-28 to 2024-03-04 [RAW]
<p>Original logger data files from radiometer measurements on a sun tracker of global, direct and diffuse shortwave irradiance and longwave irradiance at roof-level at the site Paris – Chemin Vert Bobigny in the NE of the built-up area of Paris.</p>
Data from Radiometer (RAD) measurements at Paris – Changis (PACHAN) from 2023-03-24 to 2024-03-25 [RAW]
<p>Original logger data files from radiometer measurements of shortwave irradiance and longwave irradiance at Changis-sur-Marne (Département 77) in rural area to the ENE of Greater Paris.</p> <div> <div> <div> <div> <p>Measurements were taken at the MétéoFrance weather station at Changis / Pont de l'Ormois (ID 77084001)</p> </div> </div> </div> </div>
Data from Radiometer (RAD) measurements at Paris – Denfert-Rochereau (PADENF) from 2023-09-14 to 2024-06-17 [RAW]
<p>Original logger data files from radiometer measurements on a sun tracker of global, direct and diffuse shortwave irradiance and longwave irradiance at roof-level at the Observatoire de Paris (Institut Astrophysique de Paris) in the centre of Greater Paris (near Place Denfert-Rochereau, 14th arrondissement).</p>
Data from Radiometer (RAD) measurements at Paris – Prunay (PAPRUN) from 2023-02-07 to 2024-03-26 [RAW]
<p>Original logger data files from radiometer measurements of shortwave irradiance and longwave irradiance at Prunay-le-Temple (Département 78) in the rural region to the W of the Greater Paris region.</p> <p>Measurements were taken at the MétéoFrance weather station at Prunay-le-Temple SAPC (ID 78505001)</p>
Data from Radiometer (RAD) measurements at Paris – Wy-dit (PAWYDT) from 2023-03-24 to 2024-03-26 [RAW]
<p>Original logger data files from radiometer measurements of shortwave irradiance and longwave irradiance at Wy-dit-Joli-Village (Départment 95) in the rural area to the NW of Greater Paris.</p> <p>Measurements were taken at the MétéoFrance weather station at Wy-dit at the Route de Magny (ID 95690001)</p>
Data from Radiometer (RAD) measurements at Paris – Courdimanche (PACOUR) from 2023-02-07 to 2024-03-27 [RAW]
<p>Original logger data files from radiometer measurements of shortwave irradiance and longwave irradiance at Courdimanche-sur-Essonne (Département 91) in the rural area to the S of Greater Paris.</p> <p>Measurements were taken at the MétéoFrance weather station at Courdimanche near Carrefour D449-D205 (ID <span>91184001</span>)</p> <p> </p>
Data from Radiometer (RAD) measurements at Paris – Aunay (PAAUNA) from 2022-12-16 to 2024-03-28 [RAW]
<p>Original logger data files from radiometer measurements on a sun tracker of global, direct and diffuse shortwave irradiance and longwave irradiance at Aunay-sous-Auneau (Département 28) in the rural area to the SW of Greater Paris.</p>
Data from Radiometer (RAD) measurements at Paris – Nangis (PANANG) from 2023-01-26 to 2024-03-27 [RAW]
<p>Original logger data files from radiometer measurements of shortwave irradiance and longwave irradiance at Nangis (Départment 77) in the rural area to the SE of Greater Paris.</p> <p>Measurements were taken at the MétéoFrance weather station at Nangis on the airfield at Nangis-les-Loges (ID 77211001)</p>
Data from Radiometer (RAD) measurements at Paris – Compiègne (PACOMP) from 2023-01-27 to 2024-03-25 [RAW]
<p>Original logger data files from radiometer measurements on a sun tracker of global, direct and diffuse shortwave irradiance and longwave irradiance at Compiègne (Départment 60) in the rural region to the NNE of Greater Paris.</p> <p>Measuerments were taken on the roof of the Université de Technologie de Compiègne.</p>
Data from Radiometer System (RAD) measurements at Paris – Saint Félix (PASTFE) from 2023-02-03 to 2024-03-26 [RAW]
<p>Original logger data files from radiometer measurements of shortwave irradiance, longwave irradiance and weather data near Musée Moulin Brosserie de Saint Félix (Départment 60) in the rural area to the N of Greater Paris.</p>
Data from: Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing
Rapid and inexpensive methods for genomewide single nucleotide polymorphism (SNP) discovery and genotyping are urgently needed for population management and conservation. In hybridized populations, genomic techniques that can identify and genotype thousands of species-diagnostic markers would allow precise estimates of population- and individual-level admixture as well as identification of 'super invasive' alleles, which show elevated rates of introgression above the genomewide background (likely due to natural selection). Techniques like restriction-site-associated DNA (RAD) sequencing can discover and genotype large numbers of SNPs, but they have been limited by the length of continuous sequence data they produce with Illumina short-read sequencing. We present a novel approach, overlapping paired-end RAD sequencing, to generate RAD contigs of >300–400 bp. These contigs provide sufficient flanking sequence for design of high-throughput SNP genotyping arrays and strict filtering to identify duplicate paralogous loci. We applied this approach in five populations of native westslope cutthroat trout that previously showed varying (low) levels of admixture from introduced rainbow trout (RBT). We produced 77 141 RAD contigs and used these data to filter and genotype 3180 previously identified species-diagnostic SNP loci. Our population-level and individual-level estimates of admixture were generally consistent with previous microsatellite-based estimates from the same individuals. However, we observed slightly lower admixture estimates from genomewide markers, which might result from natural selection against certain genome regions, different genomic locations for microsatellites vs. RAD-derived SNPs and/or sampling error from the small number of microsatellite loci (n = 7). We also identified candidate adaptive super invasive alleles from RBT that had excessively high admixture proportions in hybridized cutthroat trout populations.
Data from: Development and preliminary evaluation of a genome-wide single-nucleotide polymorphisms resource generated by RAD-seq for the small yellow croaker (Larimichthys polyactis)
Recent advances in high-throughput sequencing technologies have offered the possibility to generate genome-wide sequence data to delineate previously unidentified genetic structure, obtain more accurate estimates of demographic parameters, and to evaluate potential adaptive divergence. Here, we identified 27 556 single-nucleotide polymorphisms for the small yellow croaker (Larimichthys polyactis) using restriction-site-associated DNA (RAD) sequencing of 24 individuals from two populations. Significant sources of genetic variation was identified, with an average nucleotide diversity (π) of 0.00105 ± 0.000425 across individuals and long-term effective population size was thus estimated to range between 26 172 and 261 716. According to the results, no differentiation between the two populations was detected based on the SNP dataset of top quality score per contig or neutral loci. However, the two analyzed populations were highly differentiated based on SNP dataset of both top FST value per contig and the outlier SNPs. Moreover, local adaptation was highlighted by an FST-based outlier tests implemented in LOSITAN and a total of 538 potentially locally selected SNPs were identified. BLAST2GO annotation of contigs containing the outlier SNPs yielded hits for 37 (66%) of 56 significant BLASTX matches. Candidate genes for local adaptation constituted a wide array of biological functions, including cellular response to oxidative stress, actin filament binding, ion transmembrane transport and synapse assembly. The generated SNP resources in the present study provided a valuable tool for future population genetics and genomics studies of L. polyactis.
Data from: Would an RRS by any other name sound as RAD?
1. Sampling markers throughout a genome with restriction enzymes emerged in the 2000s as reduced representation shotgun sequencing (RRS). Rapid advances in sequencing technology have since spurred modifications of RRS, giving rise to many derivatives with unique names, such as restriction site-associated DNA sequencing (RADseq). But naming conventions have often been more creative than consistent and criteria for recognizing unique methods have been unclear, resulting in a proliferation of names characterized by ambiguity. 2. We give an overview of methodological and etymological relationships among 36 restriction enzyme-based methods, and survey the consistency of references to five prominent methods in the literature. 3. We identified several instances of methodological convergence, and note that many published derivatives have modified only minor elements of parent protocols. Misattribution through ambiguous or inconsistent literature references was observed in 8.4% of journal articles citing the original one and two-enzyme RADseq and GBS, as well as SBG publications. 4. The rapid expansion of names associated with derivative protocols is confusing and, in many cases, unwarranted. We urge greater restraint in naming derivative methods and suggest general guidelines for naming that promote a balance between clarity, descriptiveness, and recognition of scientific innovation.
Investigating the genetic basis of vertebrate dispersal combining RNA-seq, RAD-seq and quantitative genetics
<p>Although animal dispersal is known to play key roles in ecological and evolutionary processes such as colonization, population extinction and local adaptation, little is known about its genetic basis, particularly in vertebrates. Untapping the genetic basis of dispersal should deepen our understanding of how dispersal behaviour evolves, the molecular mechanisms that regulate it and link it to other phenotypic aspects in order to form the so-called dispersal syndromes. Here, we comprehensively combined quantitative genetics, genome-wide sequencing and transcriptome sequencing to investigate the genetic basis of natal dispersal in a known ecological and evolutionary model of vertebrate dispersal: the common lizard, <em>Zootoca vivipara.</em> Our study supports the heritability of dispersal in semi-natural populations, with less variation attributable to maternal and natal environment effects. In addition, we found an association between natal dispersal and both variation in the carbonic anhydrase (<em>CA10</em>) gene, and in the expression of several genes (<em>TGFB2</em>, <em>SLC6A4</em>, <em>NOS1</em>) involved in central nervous system functioning. These findings suggest that neurotransmitters (serotonin and nitric oxide) are involved in the regulation of dispersal and shaping dispersal syndromes. Several genes from the circadian clock (<em>CRY2, KCTD21</em>) were also differentially expressed between disperser and resident lizards, supporting that the circadian rhythm, known to be involved in long-distance migration in other taxa, might affect dispersal as well. Since neuronal and circadian pathways are relatively well conserved across vertebrates, our results are likely to be generalisable, and we therefore encourage future studies to further investigate the role of these pathways in shaping dispersal in vertebrates.</p>
The Efficacy of RAD 001 as Second Line Therapy in Patients With Transitional Cell Carcinoma TCC of the Urothelium
ClinicalTrials.gov study NCT01801137. IPD Sharing: Not stated. Countries: 1. Publications: 0.
A Novel Pathway to Detect Muscle-invasive Bladder Cancer Based on Integrated Clinical Features and VI-RADS Score on MRI
ClinicalTrials.gov study NCT06807008. IPD Sharing: NO. Countries: 1. Publications: 0.
PSMA PET/MRI-Guided Prostate Biopsy for PI-RADS ≤3 and Prior Negative Biopsy
ClinicalTrials.gov study NCT06923657. IPD Sharing: NO. Countries: 1. Publications: 0.
Validation of VI-RADS for the Detection of Detrusor Muscle Invasion
ClinicalTrials.gov study NCT05123404. IPD Sharing: NO. Countries: 1. Publications: 0.
rAd-p53 Gene Therapy for Advanced Oral and Maxillofacial Malignant Tumors
ClinicalTrials.gov study NCT00902083. IPD Sharing: Not stated. Countries: 1. Publications: 0.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.