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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Time-course single-cell and spatial transcriptomics of reovirus-induced myocarditis in neonatal mice
GEO Series GSE189636. Mus musculus. 29 samples. Type: Expression profiling by high throughput sequencing.
Multi-resolution deconvolution of spatial transcriptomics data reveals continuous patterns of inflammation (Spatial scRNA-Seq)
GEO Series GSE173776. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
GEO Series GSE246717. Mus musculus. 781 samples. Type: Expression profiling by high throughput sequencing.
Spatial Transcriptomics-based Identification of Molecular Markers for Nanomedicine Distribution in Tumor Tissue
GEO Series GSE196506. Mus musculus. 1 samples. Type: Other.
Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics
GEO Series GSE217058. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
The spatial transcriptomic atlas of human limbus and vital niche microenvironment regulating the fate of limbal epithelial stem cells
GEO Series GSE262250. Homo sapiens. 2 samples. Type: Other.
Seq-Scope: Submicrometer-resolution spatial barcoding technology that enables microscopic examination of tissue transcriptome at single cell and subcellular levels
GEO Series GSE169706. synthetic construct; Mus musculus. 4 samples. Type: Other.
Spatial transcriptomics dataset of primary tumours from MDA-MB-231 xenograft model
GEO Series GSE300613. Homo sapiens; Mus musculus. 2 samples. Type: Other.
Integrative Analysis of Spatial Transcriptome with Single-cell Transcriptome and Single-cell Epigenome in Mouse Lungs after Immunization
GEO Series GSE190225. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics [10X_scATACseq]
GEO Series GSE141586. Drosophila melanogaster. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Integration of spatial protein imaging and transcriptomics in the human kidney tracks the regenerative potential of proximal tubules
GEO Series GSE298953. Homo sapiens. 1 samples. Type: Other.
Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis
GEO Series GSE267904. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics]
GEO Series GSE284571. Mus musculus. 8 samples. Type: Other.
Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface
GEO Series GSE159709. Danio rerio. 6 samples. Type: Expression profiling by high throughput sequencing.
Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer
GEO Series GSE277783. Homo sapiens. 64 samples. Type: Other.
Spatial Transcriptomics of human fetal liver
GEO Series GSE167096. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
The Deciphering of Mouse Uterine Microenvironment during Early Pregnancy [spatial transcriptomics]
GEO Series GSE181169. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of murine eyelid
GEO Series GSE274497. Mus musculus. 1 samples. Type: Other.
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics - Slide-Seq
GEO Series GSE260797. Mus musculus. 10 samples. Type: Other.
Spatial transcriptomics sequencing profiles of human breast tissue
GEO Series GSE246518. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.