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271
datasets available to search
ShareScore release 0.9.0
Dataset results
271 results for “scATAC”
A Retinoic Acid:YAP1 signaling axis controls atrial lineage commitment [scATAC-seq]
GEO Series GSE271216. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Autophagy controls DNA accessibility to immunoglobulin variable regions and centroblast dynamics [scATAC-seq]
GEO Series GSE218050. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Hierarchical interactions between chromatin remodeling transcription factors define the epigenetic landscape of antiviral T cells [scATAC]
GEO Series GSE184006. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multi-omics analyses reveal DjTcf4 critical for proper timing of differentiation in planarian regeneration [scATAC_head]
GEO Series GSE305723. Dugesia japonica. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mutant IDH impairs chromatin binding by PDGFB to promote chromosome instability [scATAC-Seq]
GEO Series GSE280597. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Nuclear receptor coregulator NRIP1 R448G modulates T cell gut-homing and Teff:Treg balance to control intestinal inflammation [scATAC-Seq]
GEO Series GSE236564. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A functional subpopulation of human glioma associated macrophages linked to malignant glioma progression [scATAC-seq]
GEO Series GSE275224. Homo sapiens. 21 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide maps of chromatin state in cultured male germline stem cells [scATAC-seq]
GEO Series GSE159414. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
scATAC-seq analysis of Msi2CreER-MycT58A Mouse Pre-cancer and Pancreas ASCP tumor
GEO Series GSE181408. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chemical-based external stimulation reprograms BJs into FiNs (scATAC-seq)
GEO Series GSE206767. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multi-omic analysis of cell-of-origin and epigenomic state in pediatric H3K27M gliomas (scATAC-Seq)
GEO Series GSE210565. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [scATAC-seq]
GEO Series GSE212481. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ERG activates a stem-like proliferation-differentiation program in prostate epithelial cells with mixed basal-luminal identity [scATAC-seq]
GEO Series GSE258962. Mus musculus. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
scATAC-seq of murine B cells post NP-OVA immunization
GEO Series GSE299466. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
NF-kB Broadly Orchestrates Nucleosome Remodeling during the Primary Response to Toll-Like Receptor 4 Signaling [scATAC-seq]
GEO Series GSE248713. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The origin and dynamics of cellular heterogeneity vary across lineage subtypes of castrate resistant prostate cancer [scATAC-seq]
GEO Series GSE237601. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Decoding Aging in the Heart via Single Cell Dual Omics of Non-Cardiomyocytes (scATAC-Seq)
GEO Series GSE277701. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
B cell leukemia co-opts a hematopoietic stem cell-CD4 T cell tolerance program that facilitates relapse [scATAC-Seq]
GEO Series GSE262391. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Loss of epigenetic regulation disrupts lineage commitment and promotes breast cancer (scATAC-Seq)
GEO Series GSE178422. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Benchmarking Bulk and Single-cell Variant Calling Approaches on Chromium scRNA-seq and scATAC-seq Libraries
GEO Series GSE213503. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.