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1,118 results for “subterranean biology”
Figure 4 from: Niemiller ML, Cannizzaro AG, Sawicki TR, Culver DC (2024) A new species of Stygobromus Cope, 1872 (Amphipoda, Crangonyctidae) from a hypotelminorheic seepage spring in Washington, D.C., USA. Subterranean Biology 48: 117-146. https://doi.org/10.3897/subtbiol.48.112984
Figure 4 Stygobromus anacostensis sp. nov., Holotype male, 5.9 mm (USNM 1606902): A gnathopod 1 (palm and dactyl enlarged) B gnathopod 2 (rastellate seta, palm and dactyl enlarged). Scale bar: 0.5 mm.
Figure 7 from: Niemiller ML, Cannizzaro AG, Sawicki TR, Culver DC (2024) A new species of Stygobromus Cope, 1872 (Amphipoda, Crangonyctidae) from a hypotelminorheic seepage spring in Washington, D.C., USA. Subterranean Biology 48: 117-146. https://doi.org/10.3897/subtbiol.48.112984
Figure 7 Stygobromus anacostensis sp. nov., Allotype female, 5.3 mm (USNM 1606903): A antenna 2 B gnathopod 1 (palm and dactyl enlarged) C gnathopod 2 (rastellate seta, palm and dactyl enlarged). Scale bars: 0.25 mm (A); 0.5 mm (B, C).
Figure 5 from: Niemiller ML, Cannizzaro AG, Sawicki TR, Culver DC (2024) A new species of Stygobromus Cope, 1872 (Amphipoda, Crangonyctidae) from a hypotelminorheic seepage spring in Washington, D.C., USA. Subterranean Biology 48: 117-146. https://doi.org/10.3897/subtbiol.48.112984
Figure 5 Stygobromus anacostensis sp. nov., Holotype male, 5.9 mm (USNM 1606902): A pereopod 3 B pereopod 4 C pereopod 5 D pereopod 6 E pereopod 7 F bifurcate sternal gill located on somites 6 and 7. Scale bar: 0.5 mm.
Figure 3 from: Niemiller ML, Cannizzaro AG, Sawicki TR, Culver DC (2024) A new species of Stygobromus Cope, 1872 (Amphipoda, Crangonyctidae) from a hypotelminorheic seepage spring in Washington, D.C., USA. Subterranean Biology 48: 117-146. https://doi.org/10.3897/subtbiol.48.112984
Figure 3 Stygobromus anacostensis sp. nov., Paratype male, 5.7 mm (USNM 1606904): A upper lip D maxilla 2. Holotype male, 5.9 mm (USNM 1606902): B lower lip C maxilla 1 E maxilliped (distal margin of inner plate enlarged). Scale bars: 0.25 mm.
Figure 2 from: Niemiller ML, Cannizzaro AG, Sawicki TR, Culver DC (2024) A new species of Stygobromus Cope, 1872 (Amphipoda, Crangonyctidae) from a hypotelminorheic seepage spring in Washington, D.C., USA. Subterranean Biology 48: 117-146. https://doi.org/10.3897/subtbiol.48.112984
Figure 2 Stygobromus anacostensis sp. nov., Holotype male, 5.9 mm (USNM 1606902): A antenna 1 (single aesthetasc enlarged) C left mandible (palp omitted) D right mandible (lacinia mobilis enlarged). Paratype male, 5.7 mm (USNM 1606904): B antenna 2 (single calceolus enlarged). Scale bars: 0.5 mm (A, B); 0.25 mm (C, D).
Figure 11 from: Niemiller ML, Cannizzaro AG, Sawicki TR, Culver DC (2024) A new species of Stygobromus Cope, 1872 (Amphipoda, Crangonyctidae) from a hypotelminorheic seepage spring in Washington, D.C., USA. Subterranean Biology 48: 117-146. https://doi.org/10.3897/subtbiol.48.112984
Figure 11 Maximum-likelihood phylogeny and species delimitations of Stygobromus anacostensis and other S. tenuis species group taxa for the mtDNA dataset (co1+16s loci). Asterisk represents bootstrap node support greater than 90. Colored bars represented hypothesized MOTU groupings (i.e., species) based on corresponding delimitation analyses.
Figure 12 from: Niemiller ML, Cannizzaro AG, Sawicki TR, Culver DC (2024) A new species of Stygobromus Cope, 1872 (Amphipoda, Crangonyctidae) from a hypotelminorheic seepage spring in Washington, D.C., USA. Subterranean Biology 48: 117-146. https://doi.org/10.3897/subtbiol.48.112984
Figure 12 Maximum-likelihood phylogenies of of Stygobromus anacostensis and other S. tenuis species group taxa for the (A) mtDNA+nucDNA dataset (co1+16s+18s+28s+h3 loci) and (B) nucDNA dataset (18s+28s+h3 loci). Asterisk represents bootstrap node support greater than 90.
Figure 10 from: Niemiller ML, Cannizzaro AG, Sawicki TR, Culver DC (2024) A new species of Stygobromus Cope, 1872 (Amphipoda, Crangonyctidae) from a hypotelminorheic seepage spring in Washington, D.C., USA. Subterranean Biology 48: 117-146. https://doi.org/10.3897/subtbiol.48.112984
Figure 10 The type locality of S. anacostensis is a small hypotelminorheic seepage spring just off of Malcolm X Avenue, Shepherd Parkway, Washington, D.C., USA. Photograph by Jenna Keany.
Figure 1 from: Niemiller ML, Cannizzaro AG, Sawicki TR, Culver DC (2024) A new species of Stygobromus Cope, 1872 (Amphipoda, Crangonyctidae) from a hypotelminorheic seepage spring in Washington, D.C., USA. Subterranean Biology 48: 117-146. https://doi.org/10.3897/subtbiol.48.112984
Figure 1 Stygobromus anacostensis sp. nov., habitus: A holotype male, 5.9 mm (USNM 1606902) B Allotype female, 5.3 mm (USNM 1606903). Scale bar: 1 mm.
Figure 3 from: Le Cesne M, Hoch H, Zhang Y, Bourgoin T (2024) Why cave planthoppers study matters: are Cixiidae a subtroglophile lineage? (Hemiptera, Fulgoromorpha). Subterranean Biology 48: 147-170. https://doi.org/10.3897/subtbiol.48.117086
Figure 3 Resulting distributions and phylogenies of closely related species with one species moved to cavernicoly (C), according the two explanatory models, the 'Adaptive Shift Hypothesis' (ASH) or the 'Climatic Relict Hypothesis' (CRH). with possible subsequent scenarios: in-cave speciation (ASH 2, CRH 2) or possible return to epigean (E) conditions (ASH 3, CRH 3). Red circle denotes the node of the first common ancestor linking the cave species and its closest extant epigean relative.
Figure 2 from: Le Cesne M, Hoch H, Zhang Y, Bourgoin T (2024) Why cave planthoppers study matters: are Cixiidae a subtroglophile lineage? (Hemiptera, Fulgoromorpha). Subterranean Biology 48: 147-170. https://doi.org/10.3897/subtbiol.48.117086
Figure 2 A roots along the wall in a limestone cave of the south of France (Grégoire Maniel) B roots hanging from the ceiling of a lava tube in La Réunion (Fred Melon).
Supplementary material 1 from: Fišer C, Bračko G, Delić T, Fišer Ž, Jugovic J, Moškrič A, Prevorčnik S, Verovnik R, Zagmajster M, Zakšek V, Trontelj P (2024) Professor Boris Sket (1936–2023): the SpeleoBiologist and much more. Subterranean Biology 48: 171-201. https://doi.org/10.3897/subtbiol.48.122645
Bibliography of Boris Sket
Figure 2 from: Fišer C, Bračko G, Delić T, Fišer Ž, Jugovic J, Moškrič A, Prevorčnik S, Verovnik R, Zagmajster M, Zakšek V, Trontelj P (2024) Professor Boris Sket (1936–2023): the SpeleoBiologist and much more. Subterranean Biology 48: 171-201. https://doi.org/10.3897/subtbiol.48.122645
Figure 2 Timeline of Boris Sket. Upper left: just arrived in 1936. Upper right: serving army near Valjevo, Serbia. Bottom: sampling interstitial near Ulcinj, Montenegro. (Photo: Boris Sket archive).
Figure 4 from: Fišer C, Bračko G, Delić T, Fišer Ž, Jugovic J, Moškrič A, Prevorčnik S, Verovnik R, Zagmajster M, Zakšek V, Trontelj P (2024) Professor Boris Sket (1936–2023): the SpeleoBiologist and much more. Subterranean Biology 48: 171-201. https://doi.org/10.3897/subtbiol.48.122645
Figure 4 Ecological stratification of water column in anchialine caves. Boris was one the first who studied the vertical stratification of abiotic factors and with it associated community structure. After Sket 1896.
Figure 3 from: Fišer C, Bračko G, Delić T, Fišer Ž, Jugovic J, Moškrič A, Prevorčnik S, Verovnik R, Zagmajster M, Zakšek V, Trontelj P (2024) Professor Boris Sket (1936–2023): the SpeleoBiologist and much more. Subterranean Biology 48: 171-201. https://doi.org/10.3897/subtbiol.48.122645
Figure 3 Left: The parkelj, or Krampus, from Boris' childhood memories, after which he named the black olm, Proteus anguinus parkelj. Right: Boris' favourite amphipods, Niphargus balcanicus (upper), and Jugogammarus kusceri (bottom). (Photo: Boris Sket archive).
Supplementary material 1 from: Weber D, Brad T, Stoch F, Flot J-F (2021) Rediscovery and redescription of Niphargus enslini Karaman, 1932 (Amphipoda, Niphargidae) in southern Germany. Subterranean Biology 40: 65-89. https://doi.org/10.3897/subtbiol.40.73017
Tables S1–S4, Figure S1
Figure 7 from: Weber D, Brad T, Stoch F, Flot J-F (2021) Rediscovery and redescription of Niphargus enslini Karaman, 1932 (Amphipoda, Niphargidae) in southern Germany. Subterranean Biology 40: 65-89. https://doi.org/10.3897/subtbiol.40.73017
Figure 7 Niphargus enslini, male from the Blätterteighöhle A antenna I B, C accessory flagellum of antenna I D aesthetascs on antennulary segments of flagellum E antenna II.
Figure 4 from: Weber D, Brad T, Stoch F, Flot J-F (2021) Rediscovery and redescription of Niphargus enslini Karaman, 1932 (Amphipoda, Niphargidae) in southern Germany. Subterranean Biology 40: 65-89. https://doi.org/10.3897/subtbiol.40.73017
Figure 4 Haplotype network of COI of the Niphargus enslini – Niphargus virei clade (original data and data downloaded from GenBank). Colors distinguish the four putative species delimited by applying ABGD to the COINiphargus dataset.
Figure 2 from: Weber D, Brad T, Stoch F, Flot J-F (2021) Rediscovery and redescription of Niphargus enslini Karaman, 1932 (Amphipoda, Niphargidae) in southern Germany. Subterranean Biology 40: 65-89. https://doi.org/10.3897/subtbiol.40.73017
Figure 2 Distribution of Niphargus enslini. Black circles indicate the type locality and the new sampling sites; Wimsener Höhle where Niphargus virei is cited is reported in red. All the sites are clearly located in the same karstic aquifer. The record from Buchbrunnenquelle is not indicated here as it is probably erroneous.
Figure 13 from: Weber D, Brad T, Stoch F, Flot J-F (2021) Rediscovery and redescription of Niphargus enslini Karaman, 1932 (Amphipoda, Niphargidae) in southern Germany. Subterranean Biology 40: 65-89. https://doi.org/10.3897/subtbiol.40.73017
Figure 13 Niphargus enslini, topotype female from the Falkensteiner Höhle (BZM 24795) A pleonites 2–3, dorsal margin with spines B epimeral plates 1–3 (left side) C gnathopod II with gill and oostegite (enlarged: the palmar corner), outer side D dactylopodite of pereopod 7 E uropod III (left).
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.