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2,445 results for “Genetics: population”
Epigenetic and genetic influences on DNA methylation variation in maize populations
GEO Series GSE46949. Zea mays. 86 samples. Type: Methylation profiling by genome tiling array.
Affymetrix SNP array data for Genetic Structure of the Newfoundland Population samples
GEO Series GSE74392. Homo sapiens. 442 samples. Type: Genome variation profiling by genome tiling array; Genome variation profiling by SNP array.
Genetic and dietary modulators of inflammation in the gastro-intestinal tract of BXD genetic reference population
GEO Series GSE225791. Mus musculus. 99 samples. Type: Expression profiling by array.
A mechanistic basis for genetic assimilation in natural fly populations
GEO Series GSE255491. Drosophila melanogaster. 17 samples. Type: Other.
Genetic and dietary determinants of gut microbiome-bile acid interactions in BXD recombinant inbred mouse population
GEO Series GSE272489. Mus musculus. 64 samples. Type: Expression profiling by array.
FIGURE 1 in Genetic variability among Paralaudakia microlepis (Blanford, 1874) (Sauria: Agamidae) populations in the Iranian Plateau
FIGURE 1. Map of Iran showing the localities of the examined specimens. The colors of the circles refer to clades and correspond with the clades in Figure 2.
Subspecies and Distribution. R. c.c clivosus Cretzschmar, 1828 - SWJordan, W & C Saudi Arabia, Yemen, and SW Oman. R c. acrotis Heuglin, 1862 — Eritrea, Ethiopia, Djibouti, and N Somalia. R c. augur ÌL. Andersen, 1904 — N & C South Africa. R c. brachygnathus K. Andersen, 1905 - Israel, Egypt, and N Sudan. R c. geoffmyii A. Smith, 1829 — SW South Africa. R c. keniensis Hollister, 1916 - SE Sudan, South Sudan, Uganda, NE DR Congo, Rwanda, Burundi, Kenya, and N Tanzania; other records throughout C Africa need further investigation. R c. schwarzi Heim de Balsac, 1934 - SE Algeria and W Libya. 7t c., socotranus Benda, Reiter & Vallo, 2017 - Socotra I, Yemen. AE c. zambesiensis K. Andersen, 1904 - S Tanzania, Malawi, Zambia, and SE DR Congo S to NE South Africa. R c. zuluensis K. Andersen, 1904 - E & S South Africa, Swaziland, and Lesotho. There is also a record from W DR Congo with no subspecific affinity and populations from Namibia and SW Angola are not currently assigned to any subspecies but might be associated with subspecies augur or geoffroyii following further morphological and genetic tests. in Rhinolophidae
Subspecies and Distribution. R. c.c clivosus Cretzschmar, 1828 - SWJordan, W & C Saudi Arabia, Yemen, and SW Oman. R c. acrotis Heuglin, 1862 — Eritrea, Ethiopia, Djibouti, and N Somalia. R c. augur ÌL. Andersen, 1904 — N & C South Africa. R c. brachygnathus K. Andersen, 1905 - Israel, Egypt, and N Sudan. R c. geoffmyii A. Smith, 1829 — SW South Africa. R c. keniensis Hollister, 1916 - SE Sudan, South Sudan, Uganda, NE DR Congo, Rwanda, Burundi, Kenya, and N Tanzania; other records throughout C Africa need further investigation. R c. schwarzi Heim de Balsac, 1934 - SE Algeria and W Libya. 7t c., socotranus Benda, Reiter & Vallo, 2017 - Socotra I, Yemen. AE c. zambesiensis K. Andersen, 1904 - S Tanzania, Malawi, Zambia, and SE DR Congo S to NE South Africa. R c. zuluensis K. Andersen, 1904 - E & S South Africa, Swaziland, and Lesotho. There is also a record from W DR Congo with no subspecific affinity and populations from Namibia and SW Angola are not currently assigned to any subspecies but might be associated with subspecies augur or geoffroyii following further morphological and genetic tests.
Data from: Effects of large-scale releases on the genetic structure of red sea bream (Pagrus major, Temminck et Schlegel) populations in Japan
[No abstract filled]
Fig. 5 in Genetic structure of Parnassius mnemosyne (Lepidoptera: Papilionidae) populations in the Carpathian Basin
Fig. 5 Results of the detection of outlier loci in P. mnemosyne populations using LOSITAN. The loci with significantly higher FST values are indicated. P 0.99 the 99 % confidence limit of the simulated FST values, FST the actual values estimated between the regions, H between 'population' (region) heterozygosity. a The Bereg–Apuseni–
Fig. 3 in Genetic structure of Parnassius mnemosyne (Lepidoptera: Papilionidae) populations in the Carpathian Basin
Fig. 3 Results of PCA performed on the basis of the allele frequencies of the populations. The loci contributed most to the two axes are indicated. NM North Hungarian Mountains, TM Transdanubian Mountains, KÖR Körös region, BAEC Bereg–Apuseni–East Carpathian region
Fig. 2 in Genetic structure of Parnassius mnemosyne (Lepidoptera: Papilionidae) populations in the Carpathian Basin
Fig. 2 Distribution of alleles among the different classes in the four regions in Parnassius mnemosyne. NM North Hungarian Mountains, TM Transdanubian Mountains, KÖR Körös region, BAEC Bereg– Apuseni–East Carpathian region, all present in all regions, spec specific alleles for the given region, other present in more than one region
Fig. 1 in Genetic structure of Parnassius mnemosyne (Lepidoptera: Papilionidae) populations in the Carpathian Basin
Fig. 1 Sample sites of Parnassius mnemosyne. Populations are grouped into genetic regions. NM North Hungarian Mountains (ZNm, No, Bk1, Bk2, Bk3), TM Transdanubian Mountains (Vas, Pil, Kov, Mel, Mar, Haj, Har, Var, Bat), KÖR Körös region (Seb, Dob, Gve, Gke), BAEC Bereg– Apuseni–East Carpathian region (Mag, Tor, Sal, Szo)
Fig. 2 in Update of genetic information for the white-clawed crayfish in Spain, with new insights into its population genetics and origin
Fig. 2 Haplotype network of the concatenated haplotypes generated by the 'median-joining' method. The area of the circles is proportional to the haplotype frequency. Mutational steps between haplotypes are shown as grey lines
Fig. 3 in Update of genetic information for the white-clawed crayfish in Spain, with new insights into its population genetics and origin
Fig. 3 Phylogenetic tree derived from the parsimony (MP) analysis. Posterior probability and bootstrap values from the BI, NJ and MP analyses are given above the nodes
Fig. 4 in Update of genetic information for the white-clawed crayfish in Spain, with new insights into its population genetics and origin
Fig. 4 Pie graphs representing the relative proportion of haplotypes for each population sampled. Table 1 provides details for each population
FIGURE 3 in Plastid DNA fingerprinting of the rare Fritillaria moggridgei (Liliaceae) reveals population differentiation and genetic isolation within the Fritillaria tubiformis complex
FIGURE 3. Median-joining (MJ) network for the combined plastid DNA data set of Fritillaria tubiformis s.l. A. MJ network based on indel repeats at locus 4, 7, 8, 9, 10. Haplotypes (Ha, Hb1 and Hb2) are indicated by circles, the size of each circle being proportional to the observed frequency of each haplotype. B. MJ network for the combined plastid DNA data set of Fritillaria tubiformis s.l. based on all ten microsatellites. Median vectors are labelled mv1, mv2, mv3 and mv4. Number of changes required to explain transitions among haplotypes is indicated along the lines of the networks, except for connections that required only a single change. Information on type and number of repeat motifs contributing to the network is provided for the two main clusters (A and B) corresponding to var. burnatii and subsp. moggridgei.
FIGURE 1 in Genetic and shell-shape analyses of Orlitia borneensis (Testudines: Geoemydidae) reveal limited divergence among founders of the European zoo population
FIGURE 1. Ventral and dorsal view of a shell of Orlitia borneensis showing the landmarks used in this study.
Fig. 2. Bayesian 50 in Weak Genetic Differentiation among Populations of the Andean Ground Beetle Pelmatellus columbianus (Reiche, 1843) (Coleoptera: Carabidae)
Fig. 2. Bayesian 50% majority rule consensus tree for A) COI and B) CAD. Posterior probabilities are shown above branches and bootstrap support values for the Maximum Likelihood tree are shown below branches. Colored boxes represent sites where haplotypes are reported. C) Map showing sites where Pelmatellus columbianus was sampled; major features examined in the analysis of molecular variance are highlighted, including the western and eastern cordilleras, Mira, Chimbo, and Chanchan Valleys, and north and south of two major geographical barriers, the R´ıo Pastaza and Mt. Chimborazo.
Figure 2 in Phylogeny of the order Phoenicopteriformes and population genetics of the Caribbean flamingo (Phoenicopterus ruber: Aves)
Figure 2. Phylogeny of the order Phoenicopteriformes using cytochrome b partial sequences. The hybrid flamingos are grouped with Phoenicopterus chilensis and Phoenicopterus ruber. The Phoenicopterus ruber samples have references to their colony of origin: CU (Cuba), Bon (Bonaire) and Gal (Galápagos). As a control, we included the flamingo sequences from Torres et al. (2014) and a partial sequence of Phoenicopterus roseus (-mtDNA) GenBank: EF532932.1. The tree was inferred by using the maximum likelihood method and the Hasegawa–Kishino–Yano mutation model, numbers at the nodes represent bootstrap support.
Figure 1 in Phylogeny of the order Phoenicopteriformes and population genetics of the Caribbean flamingo (Phoenicopterus ruber: Aves)
Figure 1. Distribution area of the Caribbean flamingo (Birdlife-International, 2016; Torres-Cristiani et al., 2020). The colonies sampled in Cuba are labelled as; CP, Cayo Las Picúas; RM, Río Máximo; RC, Río Cauto; the rest of the samples come from Bonaire and Galápagos. The genetic flow between the northern and southern Caribbean colonies remains unknown.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.