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2,620 results for “Molecular Phylogeny”
FIGURE 1 in Molecular phylogeny and diversity of Laburnicola (Didymosphaeriaceae): a new species from Uzbekistan
FIGURE 1. Phylogram generated from maximum likelihood analysis based on combined LSU, SSU, ITS and TEF 1-ɑ sequence data. Periconia citlatepetlensis strains (IOM 325319, IOM 325319.2) are used as the outgroup. Bootstrap support values for ML equal to or greater than 60% and BYPP equal to or greater than 0.95 are given above the branches. The ex-type strains are in bold and black; the new isolate is in bold and red.
Figure 2. 28s in Beyond the prolegomenon: a molecular phylogeny of the Australian camaenid land snail radiation
Figure 2. 28s rDNA phylogeny: strict consensus of 787 439 unique maximum parsimony trees from 20 random addition heuristic tree bisection-reconnection searches, each collecting 50 000 trees. Basal polytomy rooted with Haplotrema vancouverense. General geographical localities indicated right; further details in Table 1.
Figure 1 in Beyond the prolegomenon: a molecular phylogeny of the Australian camaenid land snail radiation
Figure 1. Map of Australia with broad scale patterns of camaenid species diversity and Solem schema of immigration from Laurasia via South-East Asian archipelago. Distribution of samples used in this study shown by red diamonds. Numbers indicate examples of regional species diversity. East coast diversities include informal codes. Graph shows museum database species diversity east of latitude 142°E by one degree bands.
Figure 21 in Systematics and phylogeny of the hoplonemertean genus Diplomma (Nemertea) based on molecular and morphological evidence
Figure 21. Diplomma serpentina (Stimpson, 1855). A, transverse section through foregut region, showing dorsoventral muscles (indicated by arrowheads); B, transverse section through intestinal region, showing dorsoventral muscles running outside lateral nerve cord (indicated by black arrowhead) and inside ovary (indicated by white arrowheads); C, transverse section through pyloric region – dorsoventral muscles were not evident in this individual; D, transverse section through foregut region, showing dorsoventral muscles (indicated by arrowheads) running outside lateral nerve cord and lateral blood vessel; E, transverse section through foregut region, showing dorsoventral muscles (indicated by arrowhead) running outside excretory tubule. A, B, paraneotype (ZIHU-3166); C, paraneotype (ZIHU-1356); D, E, paraneotype (UPLB- NHM 0488). Abbreviations: DE, dermis; EX, excretory collecting tubule; IC, intestinal caecum; LN, lateral nerve cord; LV, lateral blood vessel; OV, ovum; PA, parenchyma; PY, pylorus; RC, rhynchocoel; ST, stomach. Scale bars: A, B = 50 Mm; C, E = 30 Mm; D = 100 Mm.
Figure 11 in Systematics and phylogeny of the hoplonemertean genus Diplomma (Nemertea) based on molecular and morphological evidence
Figure 11. Diplomma bothwellae comb. nov. (formerly Poseidonemertes bothwellae Gibson, 1982). Holotype (AM W.5890). Magnification of Figure 10 to show the dorsoventral muscle fibres (arrowed). Abbreviations: EP, epithelium; LN, lateral nerve cord; LV, lateral blood vessel; RC, rhynchocoel. Scale bar = 20 Mm.
Figure 17 in Systematics and phylogeny of the hoplonemertean genus Diplomma (Nemertea) based on molecular and morphological evidence
Figure 17. Diplomma serpentina (Stimpson, 1855). A, drawing based on neotype, showing general appearance of body in life; B, C, D, enlargements of cephalic region in dorsal (B), ventral (C), and lateral (D) aspects. Scale bar [refers to (A) only] = 3 mm.
Figure 9 in Systematics and phylogeny of the hoplonemertean genus Diplomma (Nemertea) based on molecular and morphological evidence
Figure 9. Diplomma bothwellae comb. nov. (formerly Poseidonemertes bothwellae Gibson, 1982). Holotype (AM W.5890). Transverse section through the anterior proboscis; arrows indicate the proboscis nerves. Scale bar = 20 Mm.
Figure 16 in Systematics and phylogeny of the hoplonemertean genus Diplomma (Nemertea) based on molecular and morphological evidence
Figure 16. Diplomma serpentina (Stimpson, 1855). A, photograph of narcotized specimen taken in life; B, photograph of the same specimen as (A) before anaesthetization, showing natural shape of head; C, horizontal section through head, showing arrangement of outer portion of body-wall longitudinal musculature and its derivatives; D, horizontal section through head, showing arrangement of inner portion of body-wall longitudinal musculature contributing to proboscis insertion; E, sagittal section through head, showing cephalic retractor muscle fibre derived from inner portion of divided body-wall longitudinal muscle layer. A, B, E, UPLB-NHM 0489; C, D, ZIHU-1354. Abbreviations: AG, acidophilic cephalic gland; BG, basophilic cephalic gland; BR, brain; CO, cerebral organ; CR, cephalic retractor muscle; IL, inner portion of body-wall longitudinal musculature; OL, outer portion of body-wall longitudinal musculature; PI, proboscis insertion; PR, proboscis. Scale bars: A = 3 mm; C, D = 100 Mm; E = 50 Mm.
Figure 1 in Systematics and phylogeny of the hoplonemertean genus Diplomma (Nemertea) based on molecular and morphological evidence
Figure 1. Collecting sites of Diplomma serpentina (Stimpson, 1855) in the present study. 1: Shimoda, where Yamaoka (2005) reported Paranemertes sp. that we regard as synonymous with D. serpentina. 2: Kushimoto, the type locality of Amphiporus insolitus Iwata, 1954a, a species that may be synonymous with D. serpentina.
Figure 25 in Systematics and phylogeny of the hoplonemertean genus Diplomma (Nemertea) based on molecular and morphological evidence
Figure 25. Diplomma serpentina (Stimpson, 1855). A, B, transverse section through stomach, showing seemingly appendage-like appearance of the stomach (indicated by asterisk). A, B, neotype (ZIHU-1352). Abbreviations: LN, lateral nerve cord; PR, proboscis; RC, rhynchocoel; ST, stomach. Scale bars: A, B = 100 Mm.
Figure 6 in Systematics and phylogeny of the hoplonemertean genus Diplomma (Nemertea) based on molecular and morphological evidence
Figure 6. Diplomma albimarginata comb. nov. (formerly Paramphiporus albimarginatus Kirsteuer, 1965). Syntype (AMNH 277). Transverse section showing the dorsoventral muscle fibres running laterally to the lateral nerve cord (arrowed) in the stomach region. Abbreviations: EP, epithelium; EX, excretory collecting tubule; LN, lateral nerve cord; RC, rhynchocoel. Scale bar = 20 Mm.
Figure 1 in Molecular phylogeny of the Valvatacea (Asteroidea: Echinodermata)
Figure 1. Maximum likelihood tree of valvatacean sea stars rooted against forcipulatacean + velatid sea stars. The analysis is based on 1084 bp of concatenated sequence data from two mitochondrial rDNA genes and one nuclear protein-coding gene, early-stage histone H3. As discussed in the text, solasterids are treated as part of the ingroup. The analysis was carried out in RAxML with bootstrap percentages indicated for nodes that had> 50% support. Boxed letters A–P are referred to in the text. Traditional family names are shown at the right; all families are in the Valvatida except as noted. The scale bar shows the expected number of substitutions.
FIGURE 15. Stigma types. A–C in New genera and a new species in the "Cryptanthoid Complex" (Bromeliaceae: Bromelioideae) based on the morphology of recently discovered species, seed anatomy, and improvements in molecular phylogeny
FIGURE 15. Stigma types. A–C. Conduplicate-patent type of Cryptanthus. A. C. ruthae (Leme 8756). B. C. lacerdae (Leme 9828). C. C. guanduensis (Leme 8902). D–F. Simple-erect type of Siqueiranthus cinereus (Leme 9785). G–I. Stigma types of Orthocryptanthus. G. Simple-erect type of O. santaritensis (Leme 8955). H. Simple-erect type of O. vasconcelosianus (Leme 8673). I. Simple-patent type of O. arcanus (Leme 9093). J. Conduplicate-spiral type of Krenakanthus roseolilacinus (Leme 8922). K–L. Simple-dilated type of Orthophytum. K. O. grossiorum (Leme 5584). L. O. striatifolium (Leme 6530). Bars = 2 mm.
Figure 2 in Molecular phylogeny supports invalidation of Didelphodiplostomum and Pharyngostomoides (Digenea: Diplostomidae) and reveals a Tylodelphys from mammals
Figure 2. Phylogenetic interrelationships among eight species of Alaria (syn. Pharyngostomoides) based on BI analysis of partial 28S rDNA gene sequences. BI posterior probability values lower than 80% are not shown. The new sequences generated in this study are indicated in bold. The scale bar indicates the number of substitutions per site. Biogeographical realm and family of definitive host from which specimens were collected are provided when possible; the information on biogeographical realms and families of definitive hosts is provided only for taxa confirmed with sequence data. Abbreviations of biogeographical realms: N, Nearctic; P, Palaearctic. Abbreviations of family of definitive host: Can, Canidae; Fel, Felidae; Mep, Mephitidae; Mus, Mustelidae; Pro, Procyonidae. ‡ All collected specimens are immature.
FIGURE 342 in Filling the gaps: descriptions of unnamed species included in the latest molecular phylogeny of Pholcidae (Araneae)
FIGURE 342. Known distributions of the three new species of Artema and of Magana velox sp. n.; UAE, United Arab Emirates.
FIGURES 310–311 in Filling the gaps: descriptions of unnamed species included in the latest molecular phylogeny of Pholcidae (Araneae)
FIGURES 310–311. Panjange thomi sp. n. (ZFMK, Ar 20661–62), male prosoma and chelicerae, oblique frontal view, and cleared female genitalia, dorsal view. Scale lines: 0.3.
FIGURES 283–287 in Filling the gaps: descriptions of unnamed species included in the latest molecular phylogeny of Pholcidae (Araneae)
FIGURES 283–287. Aetana mokwam sp. n. (283–285, ZFMK, Ar 20653–54) and Aetana ondawamei sp. n. (286–287, ZFMK, Ar 20658–59). 283. Male prosoma and chelicerae, oblique frontal view. 284, 286. Left procursi, prolateral views (at same scale). 285, 287. Cleared female genitalia, dorsal views; arrows point at possible membranous pockets. Scale lines: 0.5.
FIGURES 300–307. Panjange spp. live specimens. 300–303. P in Filling the gaps: descriptions of unnamed species included in the latest molecular phylogeny of Pholcidae (Araneae)
FIGURES 300–307. Panjange spp. live specimens. 300–303. P. thomi sp. n., adult and penultimate instar males, and female with egg sac, from Gunung Meja. 304–307. P. togutil sp. n., adult and penultimate instar males, females with and without eggsac, from near Sofifi.
FIGURES 272–274 in Filling the gaps: descriptions of unnamed species included in the latest molecular phylogeny of Pholcidae (Araneae)
FIGURES 272–274. Giloloa sofifi sp. n. (ZFMK, Ar 20648), left male palp, prolateral and retrolateral views, and male chelicerae, frontal view; asterisk: distinctive retrolateral process on procursus. em, embolus; gb, genital bulb; pr, procursus. Scale lines: 0.1.
FIGURES 275–276 in Filling the gaps: descriptions of unnamed species included in the latest molecular phylogeny of Pholcidae (Araneae)
FIGURES 275–276. Aetana ternate sp. n. (ZFMK, Ar 20650), left male palp, prolateral view, and male prosoma and chelicerae, oblique frontal view. em, embolus; gb, genital bulb; pr, procursus. Scale lines: 0.5.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.