Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
452
datasets available to search
ShareScore release 0.9.0
Dataset results
452 results for “Mitogenomics”
FIGURE 11 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 11. Ultragryllacris pulchra rubricapitis Bin & Bian, 2021. Female: A. head in frontal view; B–C. head and pronotum: B. dorsal view, C. lateral view; D. second and third abdominal tergites in lateral view; E–G. apex of abdomen: E. dorsal view, F. lateral view, G. ventral view; H. apices of ovipositor in lateral view.
FIGURE 8 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 8. NJ tree constructed based on cob genes. ABGD method is indicated with dark gray bars and jMOTU with light gray bars.
FIGURE 4. The secondary structures for 22 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 4. The secondary structures for 22 tRNA genes of the Ultragryllacris pulchra rubricapitis XZ273.
FIGURE 10 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 10. Ultragryllacris pulchra rubricapitis Bin & Bian, 2021. Male: A–B. head in frontal view; C–E. head and pronotum: C–D. dorsal view, E. lateral view; F–G, I. apex of abdomen: F. lateral view, G. apico-dorsal view, I. ventral view; H. ninth abdominal tergite in ventral view.
FIGURE 3. The secondary structures for 22 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 3. The secondary structures for 22 tRNA genes of the Ultragryllacris pulchra rubricapitis XZ267.
FIGURE 7 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 7. NJ tree constructed based on cox1 genes. ABGD method is indicated with dark gray bars and jMOTU with light gray bars.
FIGURE 5. The secondary structures for 22 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 5. The secondary structures for 22 tRNA genes of the Ultragryllacris pulchra rubricapitis XZ506.
FIGURE 7. 18S in Rediscovery of Bipalium admarginatum de Beauchamp, 1933 (Platyhelminthes Tricladida, Geoplanidae) in Malaysia, with molecular characterisation including the mitogenome
FIGURE 7. 18S phylogenetic tree of bipaliine geoplanids. Maximum likelihood phylogenetic tree based on 15 partial 18S genes, using the TVM+I+G4 model of evolution. The tree with the best likelihood is shown, and ML bootstrap support values are indicated. The subfamilies within the Geoplanidae (Rhynchodeminae, Geoplaninae and Bipaliinae) are indicated. Based on the matrix and method in Justine et al. (2022) with the addition of the new sequence of Bipalium admarginatum.
FIGURE 8 in Rediscovery of Bipalium admarginatum de Beauchamp, 1933 (Platyhelminthes Tricladida, Geoplanidae) in Malaysia, with molecular characterisation including the mitogenome
FIGURE 8. Phylogenetic tree of geoplanids based on nine sequences of elongation factor 1-alpha (EF1-α), including five new; only the part of the tree containing the Bipaliinae is shown. Maximum likelihood phylogenetic tree based on 9 sequences, using the GTR+I+G4 model of evolution. All OQ sequences are our own and new.
FIGURE 6 in Rediscovery of Bipalium admarginatum de Beauchamp, 1933 (Platyhelminthes Tricladida, Geoplanidae) in Malaysia, with molecular characterisation including the mitogenome
FIGURE 6. Maximum likelihood phylogenetic tree obtained from concatenated amino-acid sequences of the mitochondrial proteins of Bipalium admarginatum and other flatworms. The tree represents both Maximum likelihood and Bayesian inference phylogenies, performed using mtZOA+I+G4 and CPREV+I+G4 models of evolution, respectively. The tree with the best likelihood is shown, and bootstrap values are indicated. The BI tree had an identical topology, posterior probabilities are indicated on the right as decimal values. Subfamilies of Geoplanidae are indicated on the right. Based on the matrix and method used in Gastineau et al. (2022) with addition of the new sequence of B. admarginatum.
FIGURE 5 in Rediscovery of Bipalium admarginatum de Beauchamp, 1933 (Platyhelminthes Tricladida, Geoplanidae) in Malaysia, with molecular characterisation including the mitogenome
FIGURE 5. Sequence motifs obtained by aligning with WebLogo3 the tRNA-Thr genes annotated in the mitogenomes of Diversibipalium multilineatum, Bipalium kewense, Diversibipalium mayottensis, Bipalium vagum, Obama nungara and Amaga expatria with the suspected corresponding sequences of Humbertium covidum and Bipalium admarginatum. The height of each nucleotide indicates the conservation at that position. The blue box shows the conserved sequence of the anticodon.
FIGURE 4 in Rediscovery of Bipalium admarginatum de Beauchamp, 1933 (Platyhelminthes Tricladida, Geoplanidae) in Malaysia, with molecular characterisation including the mitogenome
FIGURE 4. Bipalium admarginatum, map of mitochondrial genome. The mitogenome codes for 12 conserved protein-coding genes, 21 tRNA and 2 rRNA.
FIGURE 3. Bipalium admarginatum, preserved specimens. A in Rediscovery of Bipalium admarginatum de Beauchamp, 1933 (Platyhelminthes Tricladida, Geoplanidae) in Malaysia, with molecular characterisation including the mitogenome
FIGURE 3. Bipalium admarginatum, preserved specimens. A, specimen MNHN JL354, undamaged; B-D, specimen MNHN JL355; B, undamaged; C, partially showing ventral surface; D, damaged, showing ventral surface and position of mouth and gonopore. A, B, photographs taken in 2019 vs. C, D, photographs taken in 2023, note that artefactual yellow colour seen in the earlier photographs has vanished. Photos by Jean-Lou Justine.
FIGURE 2. Bipalium admarginatum, live specimens photographed under artificial light. A in Rediscovery of Bipalium admarginatum de Beauchamp, 1933 (Platyhelminthes Tricladida, Geoplanidae) in Malaysia, with molecular characterisation including the mitogenome
FIGURE 2. Bipalium admarginatum, live specimens photographed under artificial light. A, specimen MNHN JL354; B, Specimen MNHN JL355. Photos by George Verdon.
FIGURE 1 in Rediscovery of Bipalium admarginatum de Beauchamp, 1933 (Platyhelminthes Tricladida, Geoplanidae) in Malaysia, with molecular characterisation including the mitogenome
FIGURE 1. Bipalium admarginatum, live specimens photographed in the field under natural light. A, specimen not collected, photographed 16-08-2019. B, specimen MNHN JL354 (a part of this specimen was used for the molecular analysis). Unscaled. Photos by George Verdon.
Supplementary material 1 from: Huang X, Gan Y, Wang L, Xu Y, Wei Z, Shi A (2023) The larval, pupal and mitogenomic characteristics of Agrilus adelphinus Kerremans, 1895 (Coleoptera, Buprestidae) from China. ZooKeys 1174: 15-33. https://doi.org/10.3897/zookeys.1174.105479
The larval, pupal and mitogenomic characteristics of Agrilus adelphinus (Coleoptera, Buprestidae) from China
Data from: Mitogenomic phylogenetics of fin whales (Balaenoptera physalus spp.): genetic evidence for revision of subspecies
Open the record for dataset details and reuse information.
Data from: Comparative and population mitogenomic analyses of Madagascar’s extinct, giant ‘subfossil’ lemurs
Open the record for dataset details and reuse information.
Data from: Mitogenomes and relatedness do not predict frequency of tool-use by sea otters
Open the record for dataset details and reuse information.
UCE phylogenomics, detection of a putative hybrid population, and one older mitogenomic node age of Batrachuperus salamanders
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.