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769 results for “Mosaic”
The (Drawn) Distributed Network Around Polarstern, MOSAiC Expedition
<p>Digital drawings of the sensors and instruments that have been deployed on the sea ice as part of the "Distributed Network" around Polarstern - during leg 1 of the year-long MOSAiC expedition to the Arctic Ocean. The drawings can be freely used in presentations and for science communication, e.g. if a wide audience needs to be addressed. We would appreciate a proper citation (e.g. Krueger and Rackow, 2020). The drawings have all been done on board of the supporting Russian research vessel Akademik Fedorov in the Arctic Ocean.</p> <p>If you are interested in higher-resolution versions (or the individual layers), or if you want a particular instrument to be drawn as well, you can contact thomas.rackow@awi.de</p>
Data from: The geographic mosaic of arms race coevolution is closely matched to prey population structure
<p>Reciprocal adaptation is the hallmark of arms race coevolution. Local coadaptation between natural enemies should generate a geographic mosaic pattern where both species have roughly matched abilities across their shared range. However, mosaic variation in ecologically relevant traits can also arise from processes unrelated to reciprocal selection, such as population structure or local environmental conditions. We tested whether these alternative processes can account for trait variation in the geographic mosaic of arms race coevolution between resistant garter snakes (<i>Thamnophis sirtalis</i>) and toxic newts (<i>Taricha granulosa</i>). We found that predator resistance and prey toxin levels are functionally matched in co-occurring populations, suggesting that mosaic variation in the armaments of both species results from the local pressures of reciprocal selection. By the same token, phenotypic and genetic variation in snake resistance deviates from neutral expectations of population genetic differentiation, showing a clear signature of adaptation to local toxin levels in newts. Contrastingly, newt toxin levels are best predicted by genetic differentiation among newt populations, and to a lesser extent, by the local environment and snake resistance. Exaggerated armaments suggest that coevolution occurs in certain hotspots, but prey population structure seems to be of particular influence on local phenotypic variation in both species throughout the geographic mosaic. Our results imply that processes other than reciprocal selection, like historical biogeography and environmental pressures, represent an important source of variation in the geographic mosaic of coevolution. Such a pattern supports the role of "trait remixing" in the geographic mosaic theory, the process by which non-adaptive forces dictate spatial variation in the interactions among species.</p>
Data from: Ontogenetic variability in crystallography and mosaicity of conodont apatite: Implications for microstructure, paleothermometry and geochemistry
<p>X-ray diffraction data from Silurian conodonts belonging to various developmental stages of the species <i>Dapsilodus obliquicostatus </i>demonstrate changes in crystallography and degree of nanocrystallite ordering (mosaicity) in both hyaline and albid crown tissue. The exclusive use of a single species in this study, combined with systematic testing of each element type at multiple locations, provided insight into microstructural and crystallographic differentiation between element position (S<sub>a</sub>, S<sub>b-c</sub>, M) as well as between juveniles and adults. A relative increase in the unit cell dimensions of the <i>a</i>-axis/<i>c</i>-axis ratio of nanocrystallites during growth was apparent in areas demonstrating single-crystal behavior but no such relationship was seen in dominantly polycrystalline areas. Systematic variations in mosaicity were identified, with mosaicity (as a proxy for disorder) increasing during growth, as well as along elements from tip to base. These results provide potential insight into the integrity of conodont apatite as a recorder of paleoseawater chemistry, as well as demonstrate the need to consider the influence of ontogeny and element position on the use of conodonts in paleothermometry and geochemical investigations. </p>
The importance of wetland margin microhabitat mosaics; the case of shorebirds and thermoregulation
<ol> <li><span><span>Wetlands, and the species that rely upon them, are under significant threat worldwide, with wetlands </span>often being completely removed or drastically altered. Successful wetland management requires an understanding of the interactions between wetland species and the microhabitats they use. The use of microhabitats for thermoregulation in wetland species is poorly studied, though anthropogenic influence on wetlands can reduce the diversity of microhabitats and thus the thermoregulatory options for animals. At high ambient temperatures birds may use the water-logged wetland margins to help with thermoregulation, and are often observed roosting in the sitting position within this microhabitat. However, whether sitting on the wet substrate helps in thermoregulation is unknown. </span></li> <li><span>In this study, we tested whether birds selectively use microhabitats across temperatures by conducting field observations of nine species of shorebirds. We use comparative analysis to determine whether birds roost more on wet substrate in the sitting posture, <i>i.e. '</i>wet-sitting', at high ambient temperatures. </span></li> <li><span>We found substrate type across the wetland margins to be important in shorebird thermoregulation, with the time spent sitting being significantly mediated by the substrate on which the bird roosted. Individuals tended to sit on bare, wet ground much more under high ambient temperatures compared with low ambient temperatures. Vegetation on the other hand was used similarly across temperatures, and likely does not provide the same thermoregulatory benefits. </span></li> <li><span>By roosting on wet substrate at high ambient temperatures, birds may increase the potential for heat dissipation across the uninsulated legs, as water-logged wetland margins are known to remain cooler than the ambient temperature or vegetated microhabitats under hot climatic conditions. </span></li> <li><span><i>Synthesis and applications</i>. Wetland creation and management requires an understanding of the functional significance of such microhabitats, not only for foraging and breeding, but also for roosting. We demonstrate that managing wetland margins is likely important in minimising heat stress in birds, with our findings emphasising the importance of maintaining open spaces in habitat mosaics for birds to use for thermoregulation. The ability of wetland species to manage heat stress is becoming exceedingly important as they are threatened by both decreased wetland availability and increasing ambient temperatures under climate change.</span></li> </ol>
High contrast yellow mosaic patterns are prey attractants for orb-weaving spiders
<p>Many animals improve their foraging success by producing signals that exploit the sensory biases of potential prey, but the specific properties that make these sensory traps effective remain unclear. We combine field experiments with phylogenetic comparative analyses to investigate the visual luring properties of different signal designs in web‐building spiders. Our field experiments used cardboard spider models to examine the effects of area of colour patches, colour and pattern on the foraging success of the colourful giant wood spider, <i>Nephila pilipes</i>. These experiments revealed that both the colour (yellow) and pattern (yellow and black mosaic) are essential for luring prey in a high ambient light environment. We subsequently used phylogenetic comparative analyses to demonstrate an evolutionary association between prey viewing environment and spider ventral signal among 63 species of orb‐weavers from 53 genera. Combined, our data show that (a) the colour of the bright body parts of orb‐weavers is essential for both diurnal and nocturnal prey attraction, whereas the pattern and area of colour patches are important for diurnal foraging and (b) the evolution of these visual lures is associated with the viewing environment, specifically ambient light intensity. We conclude that the effectiveness of colour luring might be a major driver of the convergent evolution of yellow mosaic patterns in phylogenetically divergent orb‐weavers. Our discoveries indicate that prey colour preferences and signal efficacy play a significant role in the evolution of visually mediated prey‐luring systems.</p>
How do species barriers decay? concordance and local introgression in mosaic hybrid zones of mussels
<p>The <em>Mytilus</em> complex of marine mussel species forms a mosaic of hybrid zones, found across temperate regions of the globe. This allows us to study "replicated" instances of secondary contact between closely-related species. Previous work on this complex has shown that local introgression is both widespread and highly heterogeneous, and has identified SNPs that are outliers of differentiation between lineages. Here, we developed an ancestry-informative panel of such SNPs. We then compared their frequencies in newly-sampled populations, including samples from within the hybrid zones, and parental populations at different distances from the contact. Results show that close to the hybrid zones, some outlier loci are near to fixation for the heterospecific allele, suggesting enhanced local introgression, or the local sweep of a shared ancestral allele. Conversely, genomic cline analyses, treating local parental populations as the reference, reveal a globally high concordance among loci, albeit with a few signals of asymmetric introgression. Enhanced local introgression at specific loci is consistent with the early transfer of adaptive variants after contact, possibly including asymmetric bi-stable variants (Dobzhansky-Muller incompatibilities), or haplotypes loaded with fewer deleterious mutations. Having escaped one barrier, however, these variants can be trapped or delayed at the next barrier, confining the introgression locally. These results shed light on the decay of species barriers during phases of contact.</p>
Saproxylic fly diversity in a Costa Rican forest mosaic
<p>This paper presents the first assessment of the diversity of tropical saproxylic Diptera, done on the Osa Peninsula of Costa Rica. Forty-one trees representing nine species and six plant families were sampled in a rearing experiment. In total, 272 individuals attributable to 18 families of Diptera were reared. Low abundance and species richness of flies was observed overall. A majority of taxa were in saprophagous and mycophagous larval feeding guilds, followed by predators. Host associations, successional stage, and stratum preferences are estimated for the more abundant species. The results support previous findings regarding saproxylic Diptera and their association with moist wood and secondary forests. </p>
Data from: Mosaicism in a new Eocene pufferfish highlights rapid morphological innovation near the origin of crown tetraodontiforms
Tetraodontiformes (pufferfishes and kin) is a taxonomically and structurally diverse, widely-distributed clade of acanthomorphs, whose members often serve as models for genomics and, increasingly, macroevolutionary studies. Morphologically disparate Palaeogene fossils suggest considerable early experimentation, but these flattened specimens often preserve limited information. We present a three-dimensionally preserved beaked tetraodontiform from the early Eocene (c. 53 Ma) London Clay Formation, UK. Approximately coeval with the oldest crown tetraodontiforms, †Ctenoplectus williamsi gen. et sp. nov. presents an unprecedented combination of characters, pairing a fused beak-like dentition with prominent dorsal-fin spines that insert atop transversely-expanded pterygiophores roofing the skull. Bayesian total-evidence tip-dating analysis indicates that †Ctenoplectus represents the sister lineage of Triodontidae and highlights considerable levels of homoplasy in early tetraodontiform evolution. According to our dataset, rates of morphological character evolution were elevated at the origin of crown Tetraodontiformes, especially within gymnodonts, but declined after the principal body plans were established. Such 'early burst' patterns are regarded as a hallmark of adaptive radiations, but are typically associated with diversification at smaller spatiotemporal scales. However, denser sampling of Neogene and Recent taxa is needed to confirm this pattern.
Data from: Taxonomic and functional assessment of mesopredator diversity across an estuarine habitat mosaic
A long-standing rule in ecology is that structural complexity increases abundance and diversity of organisms, but this paradigm glosses over potential trait-specific benefits of habitat structure across different regional species pools. We tested this idea using multiple response variables emphasizing taxonomic and functional diversity in seagrass-vegetated, edge, and unvegetated habitats across three estuaries in Washington State (USA). We also used these variables in tandem to evaluate functional redundancy as a proxy for ecosystem resistance and resilience. The estuaries spanned a two-fold range in richness of mesopredatory fishes and decapods. Increases in per-sample abundance with habitat structure were confined to three of seven functional groups, specifically those occupying the water column or directly associated with seagrass shoots. Consequently, seagrass reduced mesopredator diversity by reducing evenness. Habitats differed in mesopredator assemblages despite their spatial proximity (ca. 3 m), supported by multivariate analyses performed at functional and taxonomic resolutions, but site differences were less apparent functionally than taxonomically. Functional redundancy did not differ by habitat, but increased with the richness of the regional species pool. Edge habitats were generally intermediate in community structure, per-sample abundance, and diversity between seagrass and unvegetated habitats. Structural complexity provided a trait-specific enhancement of abundance, and this pattern applied across species pools. Because seagrass benefits species with certain traits, management focused on the low-intertidal estuarine habitat mosaic, rather than a particular habitat type, and on places where redundancy is already low, best supports mesopredator diversity and function.
Data from: Ants exhibit asymmetric hybridization in a mosaic hybrid zone
Research on hybridization between species provides unparalleled insights into the pre- and post-zygotic isolating mechanisms that drive speciation. In social organisms, colony-level incompatibilities may provide additional reproductive barriers not present in solitary species, and hybrid zones offer an opportunity to identify these barriers. Here, we use genotyping-by-sequencing to sequence hundreds of markers in a hybrid zone between two socially polymorphic ant species, Formica selysi and Formica cinerea. We characterize the zone, determine the frequency of hybrid workers, infer whether hybrid queens or males are produced, and investigate whether hybridization is influenced by colony social organization. We also compare cuticular hydrocarbon profiles and aggression levels between the two species. The hybrid zone exhibits a mosaic structure. The asymmetric distribution of hybrids skewed toward F. cinerea suggests a pattern of unidirectional nuclear gene flow from F. selysi into F. cinerea. The occurrence of backcrossed individuals indicates that hybrid queens and/or males are fertile, and the presence of the F. cinerea mitochondrial haplotype in 97% of hybrids shows that successful F1 hybrids will generally have F. cinerea mothers and F. selysi fathers. We found no evidence that social organization contributes to speciation, since hybrids occur in both single-queen and multiple-queen colonies. Strongly differentiated cuticular hydrocarbon profiles and heightened interspecific aggression further reveal that species recognition cues are both present and perceived. The discovery of fertile hybrids and asymmetrical gene flow is unusual in ants, and this hybrid zone will therefore provide an ideal system with which to investigate speciation in social insects.
Data from: Differential introgression in a mosaic hybrid zone reveals candidate barrier genes
Hybrid zones act as genomic sieves; although globally advantageous alleles will spread throughout the zone and neutral alleles can be freely exchanged between species, introgression will be restricted for genes that contribute to reproductive barriers or local adaptation. Seminal fluid proteins (SFPs) are known to contribute to reproductive barriers in insects and have been proposed as candidate barrier genes in the hybridizing field crickets G. pennsylvanicus and G. firmus. Here, we have used 125 SNPs to characterize patterns of differential introgression and to identify genes that may contribute to prezygotic barriers between these species. Using a transcriptome scan of the male cricket accessory gland (the site of SFP synthesis), we identified genes with major allele frequency differences between the species. We then compared patterns of introgression for genes encoding seminal fluid proteins with patterns for genes expressed in the same tissue that do not encode SFPs. We find no evidence that seminal fluid proteins have reduced gene exchange across the cricket hybrid zone. However, a number of genes exhibit dramatically reduced introgression, and many of these genes encode proteins with functional roles consistent with known barriers.
Data from: Geographic mosaic of plant evolution: extrafloral nectary variation mediated by ant and herbivore assemblages
Herbivory is an ecological process that is known to generate different patterns of selection on defensive plant traits across populations. Studies on this topic could greatly benefit from the general framework of the Geographic Mosaic Theory of Coevolution (GMT). Here, we hypothesize that herbivory represents a strong pressure for extrafloral nectary (EFN) bearing plants, with differences in herbivore and ant visitor assemblages leading to different evolutionary pressures among localities and ultimately to differences in EFN abundance and function. In this study, we investigate this hypothesis by analyzing 10 populations of Anemopaegma album (30 individuals per population) distributed through ca. 600 km of Neotropical savanna and covering most of the geographic range of this plant species. A common garden experiment revealed a phenotypic differentiation in EFN abundance, in which field and experimental plants showed a similar pattern of EFN variation among populations. We also did not find significant correlations between EFN traits and ant abundance, herbivory and plant performance across localities. Instead, a more complex pattern of ant–EFN variation, a geographic mosaic, emerged throughout the geographical range of A. album. We modeled the functional relationship between EFNs and ant traits across ant species and extended this phenotypic interface to characterize local situations of phenotypic matching and mismatching at the population level. Two distinct types of phenotypic matching emerged throughout populations: (1) a population with smaller ants (Crematogaster crinosa) matched with low abundance of EFNs; and (2) seven populations with bigger ants (Camponotus species) matched with higher EFN abundances. Three matched populations showed the highest plant performance and narrower variance of EFN abundance, representing potential plant evolutionary hotspots. Cases of mismatched and matched populations with the lowest performance were associated with abundant and highly detrimental herbivores. Our findings provide insights on the ecology and evolution of plant–ant guarding systems, and suggest new directions to research on facultative mutualistic interactions at wide geographic scales.
Data from: Are forest‐shrubland mosaics of the Cape Floristic Region an example of alternate stable states?
The idea of alternate stable states (ASS) has been used to explain the juxtaposition of distinct vegetation types within the same climate regime. ASS may explain the co‐existence of relatively inflammable closed‐canopy Afrotemperate Forest patches ("Forest") within fire‐prone open‐canopy Fynbos in the Cape Floristic Region (CFR) on sandstone‐derived soils. We evaluated the hypothesis that although fire and local topography and hydrology likely determined the paleogeographic boundaries of Forest, present‐day boundaries are additionally imposed by emergent edaphic properties and disturbance histories. We studied vegetation and edaphic properties of Forest‐Transition‐Fynbos vegetation at two sites within the CFR on sandstone‐derived soils and tracked historical change using aerial photography. Whereas Forest and Fynbos have changed little in extent or density since 1945, Transition vegetation increased into areas formerly occupied by Fynbos. Forest soils were ubiquitously more nutrient‐rich than Fynbos soils, with Transition soils being intermediate. These edaphic differences are not due to geological differences, but instead appear to have emerged as a consequence of different nutrient cycling within the different ecosystems. Soil nutrients are now so different that a switch from Fynbos to Forest is unlikely, in the short term (i.e. decades). Floristically and nutritionally, Transitional vegetation is more similar to Fynbos than Forest and may be less resilient to changes in exogenous drivers (e.g., fire). Our findings are consistent with the idea that geologically Forest and Fynbos are largely fire‐derived long‐term ASS, with the stability of each state reinforced by marked soil nutrient differences. In contrast, the intermediate Transitional vegetation that might switch states is unlikely to be stable.
Data from: Frost maintains forests and grasslands as alternate states in a montane tropical forest-grassland mosaic; but alien tree invasion and warming can disrupt this balance
1. Forest-grassland mosaics, with abrupt boundaries between the two vegetation types, occur across the globe. Fire and herbivory are widely considered primary drivers that maintain these mosaics by limiting tree establishment in grasslands, while edaphic factors and frosts are generally considered to be secondary factors that reinforce these effects. However, the relative importance of these drivers likely varies across systems. In particular, although frost is known to occur in many montane tropical mosaics, experimental evidence for its role as a driving factor is limited. 2. We used replicated in-situ transplant and warming experiments to examine the role of microclimate (frost and freezing temperatures) and soil in influencing germination and seedling survival of both native forest trees and alien invasive Acacia trees in grasslands of a tropical montane forest-grassland mosaic in the Western Ghats of southern India. 3. Seed germination of both native and alien tree species was higher in grasslands regard-less of soil type, indicating that germination was not the limiting stage to tree establishment. However, irrespective of soil type, native seedlings in grasslands incurred high mortality fol-lowing winter frosts and freezing temperatures relative to native seedlings in adjoining forests where freezing temperatures did not occur. Seedling survival through the tropical winter was thus a primary limitation to native tree establishment in grasslands. In contrast, alien Acacia seedlings in grasslands incurred much lower levels of winter mortality. Experimental night-time warming in grasslands significantly enhanced over-winter survival of all tree seedlings, but increases in recruitment were much greater for alien Acacia than for native tree seedlings. 4. Synthesis: Our results provide evidence for a primary role for frost and freezing temperatures in limiting tree establishment in grasslands of this tropical forest-grassland mosaic. Future increases in temperature are likely to release trees from this limitation and favour tree expansion into grasslands, with rates of expansion of non-native Acacia likely to be much greater than that of native trees. We suggest that studies of frost limitation to plant establishment are needed across a range of tropical ecosystems to re-evaluate the general importance of frost as a driver of vegetation transitions in the tropics.
Data from: The hidden side of a major marine biogeographic boundary: a wide mosaic hybrid zone at the Atlantic–Mediterranean divide reveals the complex interaction between natural and genetic barriers in mussels
The Almeria-Oran Front (AOF) is a recognised hotspot of genetic differentiation in the sea. It is a barrier to dispersal and an ecological boundary, which explain the position of genetic breaks. However, the maintenance of genetic differentiation is likely reinforced by genetic barriers. A general drawback of previous studies is an insufficient density of sampling sites at the transition zone with a conspicuous lack of samples from the southern coastline. We analysed the genetic structure in the mussel Mytilus galloprovincialis with ancestry-informative loci. We discovered a 600 km wide mosaic hybrid zone eastward of the AOF along the Algerian coasts. This mosaic zone provides a new twist to our understanding of the Atlantic-Mediterranean transition because it demonstrates the two lineages can live in sympatry but hardly interbreed. This implies some form of reproductive isolation must exist to maintain the two genetic backgrounds locally cohesive. The zone ends with an abrupt genetic shift at a barrier to dispersal in the Gulf of Bejaia. Simulations in models that account for hydrodynamic features of the region support the hypothesis that sister hybrid zones could have been differentially trapped at two alternative barriers to dispersal or environmental boundaries. A preponderantly unidirectional north-south gene flow next to the AOF can also maintain a patch of an intrinsically maintained genetic background in the south and the mosaic structure. Our results concur with the coupling hypothesis that suggests natural barriers mostly explain the position of genetic breaks while their maintenance must additionally require genetic barriers.
Data from: Signals of selection in outlier loci in a widely dispersing species across an environmental mosaic
Local adaptation reflects a balance between natural selection and gene flow and is classically thought to require the retention of locally adapted alleles. However, organisms with high dispersal potential across a spatially or temporally heterogeneous landscape pose an interesting challenge to this view requiring local selection every generation or when environmental conditions change to generate adaptation in adults. Here, we test for geographical and sequence-based signals of selection in five putatively adaptive and two putatively neutral genes identified in a previous genome scan of the highly dispersing purple sea urchin, Strongylocentrotus purpuratus. Comparing six populations spanning the species' wide latitudinal range from Canada to Baja California, Mexico, we find positive tests for selection in the putative adaptive genes and not in the putative neutral genes. Specifically, we find an excess of low-frequency and nonsynonymous polymorphisms in two transcription factors and a transporter protein, and an excess of common amino acid polymorphisms in the two transcription factors, suggestive of spatially balancing selection. We test for a genetic correlation with temperature, a dominant environmental variable in this coastal ecosystem. We find mild clines and a stronger association of genetic variation with temperature than latitude in four of the five putative adaptive loci and a signal of local adaptation in the Southern California Bight. Overall, patterns of genetic variation match predictions based on spatially or temporally balancing selection in a heterogeneous landscape and illustrate the value of geographical and coalescent tests on candidate loci identified in a genome-wide scan for selection.
Data from: The geographic mosaic of sex and infection in lake populations of a New Zealand snail at multiple spatial scales
Understanding how sexual and asexual forms of the same species coexist is a challenge for evolutionary biology. The Red Queen hypothesis predicts that sex is favored by parasite-mediated selection against common asexual genotypes, leading to the coexistence of sexual and asexual hosts. In a geographic mosaic, where the risk of infection varies in space, the theory also predicts that sexual reproduction would be positively correlated with disease prevalence. We tested this hypothesis in lake populations of a New Zealand freshwater snail, Potamopyrgus antipodarum, by comparing pairwise difference matrices for infection frequency and male frequency using partial Mantel tests. We conducted the test at three spatial scales: among lakes on the South Island, among depths within an intensively sampled lake (Lake Alexandrina), and within depths at Lake Alexandrina. We found that the difference in infection risk and the difference in the proportion of sexual snails were significantly and positively correlated at all spatial scales. Our results thus suggest that parasite-mediated selection contributes to the long-term coexistence of sexual and asexual individuals in coevolutionary hotspots, and that the "warmth" of hotspots can vary on small spatial scales.
Data from: Mosaic patterns of diversification dynamics following the colonization of Melanesian islands
The fate of newly settled dispersers on freshly colonized oceanic islands is a central theme of island biogeography. The emergence of increasingly sophisticated methods of macroevolutionary pattern inference paves the way for a deeper understanding of the mechanisms governing these diversification patterns on lineages following their colonization of oceanic islands. Here we infer a comprehensive molecular phylogeny for Melanesian Exocelina diving beetles. Recent methods in historical biogeography and diversification rate inference were then used to investigate the evolution of these insects in space and time. An Australian origin in the mid-Miocene was followed by independent colonization events towards New Guinea and New Caledonia in the late Miocene. One colonization of New Guinea led to a large radiation of >150 species and 3 independent colonizations of New Caledonia gave rise to about 40 species. The comparably late colonizations of Vanuatu, Hawaii and China left only one or two species in each region. The contrasting diversification trajectories of these insects on Melanesian islands are likely accounted for by island size, age and availability of ecological opportunities during the colonization stage.
Data from: A test of somatic mosaicism in the androgen receptor gene of Canada lynx (Lynx canadensis)
Background: The androgen receptor, an X-linked gene, has been widely studied in human populations because it contains highly polymorphic trinucleotide repeat motifs that have been associated with a number of adverse human health and behavioral effects. A previous study on the androgen receptor gene in carnivores reported somatic mosaicism in the tissues of a number of species including Eurasian lynx (Lynx lynx). We investigated this claim in a closely related species, Canada lynx (Lynx canadensis). The presence of somatic mosaicism in lynx tissues could have implications for the future study of exonic trinucleotide repeats in landscape genomic studies, in which the accurate reporting of genotypes would be highly problematic. Methods: To determine whether mosaicism occurs in Canada lynx, two lynx individuals were sampled for a variety of tissue types (lynx 1) and tissue locations (lynx 1 and 2), and 1,672 individuals of known sex were genotyped to further rule out mosaicism. Results: We found no evidence of mosaicism in tissues from the two necropsied individuals, or any of our genotyped samples. Conclusions: Our results indicate that mosaicism does not manifest in Canada lynx. Therefore, the use of hide samples for further work involving trinucleotide repeat polymorphisms in Canada lynx is warranted.
Data from: Mosaic heterochrony and evolutionary modularity: the trilobite genus Zacanthopsis as a case study
Logical connections exist between evolutionary modularity and heterochrony, two unifying and structuring themes in the expanding field of evolutionary developmental biology. The former sees complex phenotypes as being made up of semi-independent units of evolutionary transformation; the latter requires such a modular organization of phenotypes to occur in a localized or mosaic fashion. This conceptual relationship is illustrated here by analyzing the evolutionary changes in the cranidial ontogeny of two related species of Cambrian trilobites. With arguments from comparative developmental genetics and functional morphology, we delineate putative evolutionary modules within the cranidium and examine patterns of evolutionary changes in ontogeny at both global and local scales. Results support a case of mosaic heterochrony, i.e. a combination of local heterochronies affecting the different parts individuated in the cranidium, leading to the complex pattern of allometric repatterning observed at the global scale. Through this example, we show that recasting morphological analyses of complex phenotypes with a priori knowledge or hypotheses about their organizational and variational properties can significantly improve our interpretation and understanding of evolutionary changes among related taxa, fossil and extant. Such considerations open avenues to investigate the large-scale dynamics of modularity and its role in phenotypic evolution.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.