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Dataset results
747 results for “Open Data”
Data from: The SCOC database – a large, open and global database with sediment community oxygen consumption rates
Open the record for dataset details and reuse information.
Raw data behavior in olfactory tubing maze and open field
Open the record for dataset details and reuse information.
The benefit of augmenting open data with clinical data-warehouse EHR for forecasting SARS-CoV-2 hospitalizations in Bordeaux area, France
Open the record for dataset details and reuse information.
Data from: Open-top Bessel beam two-photon light sheet microscopy for three-dimensional pathology
Open the record for dataset details and reuse information.
Supporting data and software for: Low-temperature open-air synthesis of PVP-coated NaYF4:Yb,Er,Mn upconversion nanoparticles with strong red emission
Open the record for dataset details and reuse information.
Data from: An open spatial capture–recapture model for estimating density, movement, and population dynamics from line-transect surveys
Open the record for dataset details and reuse information.
Open Lowland Environmental Monitoring Station, Black Rock Forest, NY, raw hourly data
Black Rock Forest maintains the Open Lowland real-time weather station at 129 Continental Rd, Cornwall, NY. The system was designed to measure air temperature (average, maximum, minimum), relative humidity (average, maximum, minimum), average vapor pressure, dew point temperature, photosynthetically active solar radiation, net global solar radiation, mean horizontal wind speed, mean wind direction, standard deviation of wind direction, maximum wind speed, precipitation amount, barometric pressure (average, maximum, minimum), and average soil temperature at two depths. Other sensors are used to measure snow depth, CO2 concentration, and albedo. Data are collected from the Open Lowland Station using a CR1000. Most instruments have a sample interval of 1 minute. The program records averages, minimum or maximum of those 1-minute readings every hour. Rainfall is totals for the 1 hour period.
SOils DAta Harmonization database (SoDaH): an open-source synthesis of soil data from research networks
This SOils DAta Harmonization (SoDaH) database is designed to bring together soil carbon data from diverse research networks into a harmonized dataset that can be used for synthesis activities and model development. The research network sources for SoDaH span different biomes and climates, encompass multiple ecosystem types, and have collected data across a range of spatial, temporal, and depth gradients. The rich data sets assembled in SoDaH consist of observations from monitoring efforts and long-term ecological experiments. The SoDaH database also incorporates related environmental covariate data pertaining to climate, vegetation, soil chemistry, and soil physical properties. The data are harmonized and aggregated using open-source code that enables a scripted, repeatable approach for soil data synthesis.
Open Data as driver of critical data literacies in Higher Education: Which Data, Which Openness, Which Care?
<p>This Zenodo item contains the Report and subsidiary resources and dataset on the results of the workshop undertaken by the authors: "Open Data as driver of critical data literacies in Higher Education".</p> <p>Workshop Details:</p> <ul> <li>A workshop session offered at the OER20 [online] conference</li> <li><a href="https://oer20.oerconf.org/sessions/o-060/">https://oer20.oerconf.org/sessions/o-060/</a></li> <li>Wed, Apr 1 2020</li> <li>Theme: <a href="https://oer20.oerconf.org/tracks/open-education-for-civic-engagement-and-democracy/">Open education for civic engagement and democracy</a></li> <li>Access to the <a href="https://eu.bbcollab.com/collab/ui/session/playback/load/0983399114454947ba11426abbb3e17e">Recorded Session</a></li> </ul> <p>The workshop explored the educational potential of Open Data as a driver of interdisciplinary dialogue in learning design and pedagogical practices. It offered instruments for designing educational interventions in two simple phases:</p> <ol> <li>A conceptual (but dialogical!) introduction</li> <li>A “hands on” exercise</li> </ol> <p>The virtual environment used was Blackboard Collaborate as organized and supported by ALT and the OER20 Committee. In these conditions, 73 participants (conference attendees and external participants) engaged in the activity. The participants that expressed their geographical positions (when introducing themselves via the chat in the virtual conference environment) showed diversity, though most participants came from the UK, elsewhere in Europe, and some from Latin America.</p>
Fig. 1 in Data publication and dissemination of interactive keys under the open access model
Fig. 1. Th e ZooKeys model for data publication and dissemination of interactive keys.
Open anonymous repo hosting code and data for our submission in ASE 2020
<p>This repository presents sample publicly available anonymous source code and data for our submission in ASE 2020 conference.</p> <p>ProgressDroid source code is provided.</p> <p>Data for 10 top apps with the highest number of installs from our dataset are presented.</p> <p>For each app, we provide the following information:</p> <p>- The original APK file for the examined app.</p> <p>- The instrumented APK file using the extended Instrumenter module</p> <p>- Complete trace from running the extended AndroidSlicer tool on each app</p> <p>- Complete list of all UI update points in each specific app</p> <p>- List of slicing criteria for dynamic slicing </p> <p>- List of slices from the automated dynamic slicing analysis </p> <p>- List of all progress indicator occurrences for each trace </p> <p>- Complete runtime trace info including all events and states (including screenshots) </p> <p>Upon acceptance, we’ll complete the data sharing for all our dataset.</p>
Open Microscopy Data
<p>Raw data and rules to participate in an opinion article on open microscopy data crowdsourced over Twitter.</p>
Data for article "Triazene-Activated Donor–Acceptor Cyclopropanes: Ring-Opening and (3 + 2) Annulation Reactions"
<p>This upload contains raw data (NMR, X-Ray) files for the article: </p> <p>A. A. Suleymanov, E. Le Du, Z. Dong, B. Muriel, R. Scopelliti, F. Fadaei-Tirani, J. Waser, K. Severin, </p> <p>"Triazene-Activated Donor-Acceptor Cyclopropanes: Ring-Opening and (3 + 2) Annulation Reactions"</p> <p><em>Org. Lett. </em><strong>2020</strong>, DOI: 10.1021/acs.orglett.0c01527<em>.</em></p>
Open data of Control of damping in perpendicularly magnetized thin films using spin-orbit torques
<p>Open access data set for manuscript "Control of damping in perpendicularly magnetized thin films using spin-orbit torques" published in Physical Review B, <strong>101</strong>, 224401 (2020)</p>
La Digital Libray open data della Biblioteca del Comune di Mottola - Progetto "Terra delle Gravine"
<p><em>Terra delle Gravine tra sharing economy e turismo esperienziale</em><a href="#_ftn1">[1]</a> è un progetto finanziato dalla Regione Puglia a un consorzio di dodici comuni della provincia di Taranto, finalizzato alla formazione di studenti di scuola secondaria superiore nella descrizione di risorse digitali relative al patrimonio culturale in formato open data e alla creazione di una piattaforma, sempre in formato Open Data, di contenuti relativi ai beni culturali dei comuni coinvolti.</p> <p>Le attività sono state progettate e realizzate tra il 2017 e il 2018 dal Dipartimento di Studi Umanistici – DISUM dell’Università degli Studi di Bari e dalla spin off DABIMUS S.r.l. in collaborazione con l’Open Data Manager Pierfrancesco Paolicelli.</p> <p>I percorsi formativi e i tracciati in Open Data da utilizzare per indicizzare i beni considerati sono stati progettati in relazione alle diverse classi di beni culturali oggetto di interesse, che hanno incluso beni monumentali, beni storico artistici e demo-etnoantropologici e beni librari.</p> <p>Il DISUM, nella persona del prof. Nicola Barbuti, ha curato sia la progettazione e realizzazione del tracciato in open data utilizzato per indicizzare e pubblicare on line una selezione di volumi a stampa delle biblioteche comunali di Massafra, Mottola e Grottaglie, sia la formazione degli studenti delle scuole secondarie superiori dei tre comuni alla descrizione catalografica di risorse digitali librarie.</p> <p>I dataset sono stati strutturati conformemente alle regole definite dalla Regione Puglia nel suo catalogo <a href="http://www.dataset.puglia.it/">http://www.dataset.puglia.it/</a>, conformi all’ontologia dei luoghi della cultura e degli eventi culturali <em>Cultural ON</em> realizzata dal MiBACT nell’ambito del progetto nazionale <a href="http://dati.beniculturali.it">http://dati.beniculturali.it</a>, la piattaforma in cui il Ministero si propone di pubblicare il patrimonio culturale informativo secondo la logica dei Linked Open Data.</p> <p>Gli studenti degli istituti scolastici superiori dei tre comuni, impegnati in percorsi di Alternanza Scuola Lavoro, hanno prima seguito la formazione, quindi hanno indicizzato una selezione di volumi delle biblioteche comunali di riferimento utilizzando il tracciato in formato open data realizzato per il progetto<a href="#_ftn2">[2]</a>.</p> <p>Per facilitare la descrizione collaborativa e per la condivisione dei file con i tracciati è stata utilizzata la suite di Google Drive, di semplice utilizzo.</p> <p>Il monitoraggio degli stati di avanzamento di progetto e l’interazione con i team di studenti è stato realizzato attivando anche specifici gruppi tramite l’app Telegram, veloce, sicura, semplice e open.</p> <p>Le attività si sono svolte secondo le seguenti fasi:</p> <ul> <li>affiancamento degli studenti e formazione sui processi di indicizzazione secondo il formato di dati open CKAN;</li> <li>formazione sugli standard di descrizione digitale e indicizzazione di risorse librarie e sulla co-creazione assistita di dataset in open data;</li> <li>insegnamento sul riuso dei dati aperti per creare mappe, percorsi, infografiche, statistiche.</li> </ul> <p>Le tre digital library sono pubblicate sul sito dell’AgID <a href="http://dati.gov.it">http://dati.gov.it</a><a href="#_ftn3">[3]</a></p> <p> </p> <p><a href="#_ftnref1">[1]</a> https://terradellegravineprogettazioneperlacultura.wordpress.com/il-progetto/</p> <p><a href="#_ftnref2">[2]</a> http://www.terradellegravine.eu:3389/dataset</p> <p><a href="#_ftnref3">[3]</a> Massafra: <a href="https://dati.gov.it/dataset?id=69a7c931-b910-4acd-9f8f-47d0bd4f9dfb">https://dati.gov.it/dataset?id=69a7c931-b910-4acd-9f8f-47d0bd4f9dfb</a></p> <p>Grottaglie: <a href="https://dati.gov.it/dataset?id=644e8203-18f0-40a5-a46a-bd78cb2bd999">https://dati.gov.it/dataset?id=644e8203-18f0-40a5-a46a-bd78cb2bd999</a></p> <p>Mottola: <a href="https://dati.gov.it/dataset?id=5a99673e-2123-462e-a868-85b03c46c7fd">https://dati.gov.it/dataset?id=5a99673e-2123-462e-a868-85b03c46c7fd</a></p>
Data & Open Science analysis of citizen science projects related with pollution
<p>These two spreadsheets contain the analysis done from a Data & Open Science perspective of citizen science projects related with pollution</p>
Data from: Assessing species boundaries in the open sea: an integrative taxonomic approach to the pteropod genus Diacavolinia
To track changes in pelagic biodiversity in response to climate change, it is essential to accurately define species boundaries. Shelled pteropods are a group of holoplanktonic gastropods that have been proposed as bio-indicators because of their vulnerability to ocean acidification. A particularly suitable, yet challenging group for integrative taxonomy is the pteropod genus Diacavolinia, which has a circumglobal distribution and is the most species-rich pteropod genus, with 24 described species. We assessed species boundaries in this genus, with inferences based on geometric morphometric analyses of shell-shape variation, genetic (cytochrome c oxidase subunit I, 28S rDNA sequences) and geographic data. We found support for a total of 13 species worldwide, with observations of 706 museum and 263 freshly collected specimens across a global collection of material, including holo‐ and paratype specimens for 14 species. In the Atlantic Ocean, two species are well supported, in contrast to the eight currently described, and in the Indo‐Pacific we found a maximum of 11 species, partially merging 13 of the described species. Distributions of these revised species are congruent with well-known biogeographic provinces. Combining varied datasets in an integrative framework may be suitable for many diverse taxa and is an important first step to predicting species-specific responses to global change.
Data from: One and two year visual outcomes from the Moorfields age-related macular degeneration database: a retrospective cohort study and an open science resource
Objectives: To analyse treatment outcomes and share clinical data from a large, single-center, well-curated database (8174 eyes / 6664 patients with 120,756 single entries) of patients with neovascular age related macular degeneration (AMD) treated with anti-vascular endothelial growth factor (VEGF). By making our depersonalised raw data openly available, we aim to stimulate further research in AMD, as well as setting a precedent for future work in this area. Setting: Retrospective, comparative, non-randomised electronic medical record (EMR) database cohort study of the UK Moorfields AMD database with data extracted between 2008 and 2018. Participants: Including one eye per patient, 3357 eyes/patients (61% female). Extraction criteria were ≥ 1 ranibizumab or aflibercept injection, entry of "AMD" in the diagnosis field of the EMR, and a minimum of one year of follow-up. Exclusion criteria were unknown date of first injection and treatment outside of routine clinical care at Moorfields before the first recorded injection in the database. Main outcome measures: Primary outcome measure was change in VA at one and two years from baseline as measured in Early Treatment Diabetic Retinopathy Study (ETDRS) letters. Secondary outcomes were the number of injections and predictive factors for VA gain. Results: Mean VA gain at one-year and two years were +5.5 (95%CI:5.0,6.0) and +4.9 (95%CI:4.2,5.6) letters respectively. Fifty-four percent of eyes gained ≥5 letters at two years, 63% had stable VA (±≤14 letters), forty-four percent of eyes maintained good VA (≥70 letters). Patients received a mean of 7.7 (95%CI:7.6,7.8) injections during year one and 13.0 (95%CI:12.8,13.2) injections over two years. Younger age, lower baseline VA, and more injections were associated with higher VA gain at two years. Conclusion: This study benchmarks high quality EMR study results of real life AMD treatment and promotes open science in clinical AMD research by making the underlying data publicly available.
Data From: TERRA-REF, An open reference data set from high resolution genomics, phenomics, and imaging sensors
<p>The ARPA-E funded TERRA-REF project is generating open-access reference datasets for the study of plant sensing, genomics, and phenomics. Sensor data were generated by a field scanner sensing platform that captures color, thermal, hyperspectral, and active flourescence imagery as well as three dimensional structure and associated environmental measurements. This dataset is provided alongside data collected using traditional field methods in order to support calibration and validation of algorithms used to extract plot level phenotypes from these datasets.</p> <p>Data were collected at the University of Arizona Maricopa Agricultural Center in Maricopa, Arizona. <br> This site hosts a large field scanner with fifteen sensors, many of which are capable of capturing mm-scale images and point clouds at daily to weekly intervals.</p> <p>These data are intended to be re-used, and are accessible as a combination of files and databases linked by spatial, temporal, and genomic information. In addition to providing open access data, the entire computational pipeline is open source, and we enable users to access high-performance computing environments.</p> <p>The study has evaluated a sorghum diversity panel, biparental cross populations, and elite lines and hybrids from structured sorghum breeding populations. <br> In addition, a durum wheat diversity panel was grown and evaluated over three winter seasons.<br> The initial release includes derived data from from two seasons in which the sorghum diversity panel was evaluated.<br> Future releases will include data from additional seasons and locations.</p> <p>The TERRA-REF reference dataset can be used to characterize phenotype-to-genotype associations, on a genomic scale, that will enable knowledge-driven breeding and the development of higher-yielding cultivars of sorghum and wheat. <br> The data is also being used to develop new algorithms for machine learning, image analysis, genomics, and optical sensor engineering.</p>
Solar panels and solar farms in the UK - geographic open data (UKPVGeo)
<p>We present the results of a major crowd-sourcing campaign to create open geographic data for over 260,000 solar PV installations across the UK, covering the vast majority of the capacity in the country. We focus in particular on capturing small-scale domestic solar PV, which accounts for a significant fraction of generation but was until now very poorly documented.</p> <p>The data we introduce will enable decarbonisation at national scales, through forecasting and management of generation, and also serves as a training dataset for machine vision detection of new PV.</p> <p>For a complete description please see <a href="https://www.nature.com/articles/s41597-020-00739-0">the research paper describing the dataset</a>. Please cite this paper in any academic use of the data.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.